Difference between revisions of "KPGP 00138"

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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Public Profile ID :&nbsp; KPGP_00138 <br />
 
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    </strong></span></span></li>
 
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Gender :&nbsp; F <br />
 
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    </strong></span></span></li>
 
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Nationality :&nbsp; Korea <br />
 
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    </strong></span></span></li>
 
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Ethnic Group :&nbsp; East Asian <br />
 
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    </strong></span></span></li>
 
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Platform :&nbsp; Illumina,HiSeq2000</strong></span></span></li>
 
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</ul>
 
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<p>&nbsp;
 
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     <tbody>
 
     <tbody>
 
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         <tr>
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             <td style="text-align: center" bgcolor="#ff0000" width="50%"><b><span style="color: #ffffff"><span style="font-size: large"><span style="font-family: Arial">BioFTP Download</span></span></span></b></td>
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             <td style="text-align: center">&nbsp; <a href="http://opengenome.kr">Korean</a>&nbsp; |&nbsp; <a href="http://opengenome.net">English</a></td>
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            <td style="text-align: center" bgcolor="#006600" colspan="4"><span style="color: #ffffff"><span style="font-size: large"><b>Torrent Download</b></span></span></td>
 
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        </tr>
 
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        <tr>
 
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            <td>
 
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            <p><span style="font-size: large"><span style="font-family: Arial"><strong>Genetic data Download</strong></span></span><span style="font-size: small"><span style="font-family: Arial"><strong><br />
 
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            </strong></span></span></p>
 
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            <ul>
 
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Raw Data</strong> <a target="_blank" href="http://opengenome.net/index.php/KPGP_00138_KT">Raw Data</a><br />
 
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                </span></span></li>
 
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Aligned Data</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0023/MAPPING_RESULT/KPGP138_G_110915_HiSeq_EastAsian_Kor_F.merge.bam">Mapping</a> / <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0023/MAPPING_RESULT/KPGP138_G_110915_HiSeq_EastAsian_Kor_F.merge.bam.bai">Mapping Index</a><br />
 
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                </span></span></li>
 
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Nonsynonymous SNVs</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0023/NS_SNV/KPGP138_G_110915_HiSeq_EastAsian_Kor_F.NSSNV.gz">Nonsynonymous SNVs</a><br />
 
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                </span></span></li>
 
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Read me</strong> <a target="_blank" href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0023/README/KPGP_138.readme.txt">Read me</a><br />
 
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                </span></span></li>
 
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Genome Variation</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0023/SNV/KPGP138_G_110915_HiSeq_EastAsian_Kor_F.vcf.SNV.gz">SNVs</a> <a href="nofile">CNVs</a> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0023/INDEL/KPGP138_G_110915_HiSeq_EastAsian_Kor_F.vcf.INDEL.gz">INDELs</a> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0023/SV/KPGP138_G_110915_HiSeq_EastAsian_Kor_F.sv.gz">SVs</a>&nbsp;</span></span></li>
 
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            </ul>kpgp:
 
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            <p>&nbsp;</p>
 
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            </td>
 
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            <td colspan="3">
 
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            <ul>
 
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                <li style="text-align: center"><span style="font-size: large"><span style="font-family: Arial"><strong><span style="color: #000000"><a href="http://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP_Torrent/TGP2011D0023.torrent">Torrent Download</a></span></strong></span></span></li>
 
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            </ul>
 
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            </td>
 
 
         </tr>
 
         </tr>
 
     </tbody>
 
     </tbody>
 
</table>
 
</table>
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</p>
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<p>&nbsp;&nbsp;</p>
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<p>&nbsp;
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<table cellspacing="1" cellpadding="1" width="100%" border="0">
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<table border="1" cellspacing="1" cellpadding="1" width="100%" align="center">
 
 
     <tbody>
 
     <tbody>
 
         <tr>
 
         <tr>
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             <td style="text-align: center" bgcolor="#3366cc"><span style="color: #ffffff"><span style="font-size: large"><b>Clinic Survey </b></span></span></td>
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             <td style="text-align: center"><img alt="" width="411" height="101" src="/userfiles/434.jpg" /></td>
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            <td style="text-align: center" bgcolor="#ff33cc"><span style="color: #ffffff"><span style="font-size: large"><b>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Trait Survey </b></span></span></td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td>physical examination</td>
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             <td bgcolor="#66ccff">
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             <td>Physical Characteristics</td>
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            <h1 style="font-size: 55px; font-family: Raleway; font-weight: 400; color: rgb(29,1,61); margin: 10px 0px 13px; letter-spacing: -1px; line-height: 1; background-color: rgb(195,227,247); text-rendering: optimizelegibility">PGP Korea</h1>
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            <h1 style="font-size: 45px; font-family: Raleway; font-weight: 400; color: rgb(29,1,61); margin: 10px 0px 9px; line-height: 1; background-color: rgb(195,227,247); text-rendering: optimizelegibility">
 +
            <p style="font-size: 18px; font-family: 'Open Sans', 'Helvetica Neue', Helvetica, Arial, sans-serif; color: rgb(34,34,34); margin: 0px 0px 26px; line-height: 24px">The Personal Genome Project Korea (KPGP) is dedicated to producting publically available personal genome, health, and trait data.</p>
 +
             </h1>
 +
            </td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td>electrocardiography</td>
+
             <td>
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             <td>Eating Habits</td>
+
            <p>&nbsp;</p>
 +
             <p><span style="font-size: medium">Korean Personal Genome Project (KPGP) is a participative research project established by Genome Research Foundation([[GRF]]).<br />
 +
            The international Personal Genome Project ([[PGP]]), led by U.S. none-profit research group, is founded in 2005 and seeking a diverse range of volunteers with the purpose of improving human health.<br />
 +
            In concordance with the international PGP, KPGP was started to collect and distribute personal genome and trait data. &gt; [[more about us]]</span><span style="font-size: small"> </span></p>
 +
            </td>
 
         </tr>
 
         </tr>
 +
    </tbody>
 +
</table>
 +
<p>&nbsp;</p>
 +
<table cellspacing="1" cellpadding="1" width="100%" border="0">
 +
    <tbody>
 
         <tr>
 
         <tr>
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             <td>pulmonary function test</td>
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             <td bgcolor="#cc0000" colspan="6"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>&nbsp;KPGP Public Data</b></span></span></td>
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            <td>Tooth</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td>fundus .intraocular pressure</td>
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             <td style="text-align: center"><a href="Korean"><img alt="" width="141" height="142" src="/userfiles/1.jpg" /></a></td>
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             <td>Hair</td>
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            <td style="text-align: center"><span style="font-size: large">&nbsp;<a href="Foreigner"><img alt="" width="146" height="137" src="/userfiles/2.jpg" /></a>&nbsp;&nbsp;</span></td>
 +
            <td style="text-align: center"><span style="font-size: large"><a href="Miltiracial(people)"><img alt="" width="138" height="137" src="/userfiles/4.jpg" /></a>&nbsp;</span></td>
 +
            <td style="text-align: center"><a href="Monozygotic_Twin"><img alt="" width="147" height="138" src="/userfiles/5.jpg" /></a></td>
 +
             <td style="text-align: center"><span style="font-size: large"><a href="Dizygotic_Twin"><img alt="" width="139" height="138" src="/userfiles/6.jpg" /></a></span>&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td>Bio-Age test</td>
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             <td style="text-align: center"><b><span style="font-size: medium">[[Korean]]</span></b></td>
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             <td>Sleeping</td>
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            <td style="text-align: center"><span style="font-size: medium"><strong>[[Foreigner]]</strong></span></td>
 +
            <td style="text-align: center"><b><span style="font-size: medium">[[Miltiracial(people)]]&nbsp;&nbsp;</span></b></td>
 +
             <td style="text-align: center"><b><span style="font-size: medium">[[&nbsp;Monozygotic Twin]]&nbsp;&nbsp;&nbsp;&nbsp;</span></b></td>
 +
            <td style="text-align: center"><b><span style="font-size: medium">&nbsp;[[Dizygotic Twin]]</span></b></td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td>bone densitometry</td>
+
             <td style="text-align: center">&nbsp;</td>
−
             <td>Skin</td>
+
             <td style="text-align: center">&nbsp;</td>
 +
            <td style="text-align: center">&nbsp;</td>
 +
            <td style="text-align: center">&nbsp;</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td>gynecology</td>
+
             <td style="text-align: center"><a href="Rare_Disease_Patients"><img alt="" width="145" height="141" src="/userfiles/3.jpg" /></a></td>
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             <td>Allergies</td>
+
            <td style="text-align: center"><a href="KTuCloud+PGI"><img alt="" width="141" height="141" src="/userfiles/8.jpg" /></a></td>
 +
            <td style="text-align: center">&nbsp;</td>
 +
            <td style="text-align: center">&nbsp;</td>
 +
             <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td>breast cancer test</td>
+
             <td style="text-align: center"><b><span style="font-size: medium">[[Rare Disease Patients]]</span></b></td>
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             <td>Women's Health</td>
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            <td style="text-align: center"><b><span style="font-size: medium">[[KTuCloud+PGI]]</span></b></td>
 +
            <td style="text-align: center">&nbsp;</td>
 +
            <td style="text-align: center">&nbsp;</td>
 +
             <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 +
    </tbody>
 +
</table>
 +
<p>&nbsp;
 +
<table cellspacing="1" cellpadding="1" width="100%" border="0">
 +
    <tbody>
 
         <tr>
 
         <tr>
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             <td>body composition test</td>
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             <td bgcolor="#cc0000"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>KPGP Public Data FTP Download</b></span></span></td>
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            <td>Disease</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td>general examination of urine</td>
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             <td style="text-align: left">
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             <td>Family Disease History</td>
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            <ol>
 +
                <li><span style="font-size: medium"><a href="ftp://biodisk.org/Release/KPGP/">The Genomics Institute (TGI) FTP Site</a></span></li>
 +
                <li><span style="font-size: medium"><a href="ftp://ftp.kobic.re.kr/pub/KPGP/">Korean Bioinformation Center (KOBIC) FTP Site</a></span></li>
 +
             </ol>
 +
            </td>
 
         </tr>
 
         </tr>
 +
    </tbody>
 +
</table>
 +
</p>
 +
<p>&nbsp;
 +
<table cellspacing="1" cellpadding="1" width="100%" border="0">
 +
    <tbody>
 
         <tr>
 
         <tr>
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             <td>complete blood cell count</td>
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             <td bgcolor="#0033cc" colspan="6"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>KPGP Data Usage</b></span></span></td>
−
            <td>&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td>liver function test</td>
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             <td style="text-align: left" colspan="6">
−
            <td>&nbsp;</td>
+
            <ol>
 +
                <li><span style="font-size: medium">The genome data of PGP-Korea is hosted and provided by [[Genome Research Foundation]]. &nbsp;Anyone can use the data freely.<br />
 +
                </span></li>
 +
                <li><span style="font-size: medium">If you would like to acquire further information about the data for research publication and collaboration, please contact us. <br />
 +
                </span></li>
 +
                <li><span style="font-size: medium">Contact: </span><span style="font-size: large"><a href="mailto:info@pgi.re.kr"><span style="font-size: medium">info@pgi.re.kr</span></a><span style="font-size: medium"> / 82-43-235-8687</span></span></li>
 +
            </ol>
 +
            </td>
 
         </tr>
 
         </tr>
 +
    </tbody>
 +
</table>
 +
</p>
 +
<p>&nbsp;
 +
<table cellspacing="1" cellpadding="1" width="100%" border="0">
 +
    <tbody>
 
         <tr>
 
         <tr>
−
             <td>renal function test</td>
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             <td bgcolor="#0033cc" colspan="6"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>KPGP Data Statistics</b></span></span></td>
−
            <td>&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td>the functional test of heart and lipid test</td>
+
             <td style="text-align: left" colspan="6">
−
             <td>&nbsp;</td>
+
             <ol>
−
        </tr>
+
                <li><span style="font-size: medium"><a href="ftp://biodisk.org/Release/KPGP/KPGP_Data_2017_Release_Candidate_Report/report.html">The HTML report for the KPGP&nbsp;data statistics can be seen here</a>.<br />
−
        <tr>
+
                </span></li>
−
            <td>diabetes mellitus test</td>
+
             </ol>
−
            <td>&nbsp;</td>
+
             </td>
−
        </tr>
 
−
        <tr>
 
−
            <td>iron deficiency anemia</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>exocrine pancreatic function test</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>myocardial infarction</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>inflammatory disease</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>tests for allergic diseases</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>Electrolyte</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>thyroid function test</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>tumor marker test</td>
 
−
            <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
             <td>Skeletal diseases</td>
 
−
             <td>&nbsp;</td>
 
−
        </tr>
 
−
        <tr>
 
−
            <td>tests for hepatitis</td>
 
−
            <td>&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td>Endocrine Function Test</td>
+
             <td colspan="6">&nbsp;</td>
−
            <td>&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td>infection</td>
+
             <td style="text-align: center" colspan="6"><img alt="" width="800" height="400" src="/ckfinder/userfiles/images/sequencingDepth_WGS_2017.png" /> <img alt="" width="800" height="400" src="/ckfinder/userfiles/images/sequencingDepth_WES_2017.png" /></td>
−
            <td>&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
     </tbody>
 
     </tbody>
 
</table>
 
</table>
 
</p>
 
</p>
−
<p><span style="color: #ff0000"><span style="font-size: x-large"><b><a href="/userfiles/Research Surveys_LIST_clinic.xls">Click here to Download</a></b></span></span></p>
 
 
<p>&nbsp;</p>
 
<p>&nbsp;</p>

Revision as of 10:45, 22 June 2012

  Korean  |  English

  

PGP Korea

The Personal Genome Project Korea (KPGP) is dedicated to producting publically available personal genome, health, and trait data.

 

Korean Personal Genome Project (KPGP) is a participative research project established by Genome Research Foundation(GRF).
The international Personal Genome Project (PGP), led by U.S. none-profit research group, is founded in 2005 and seeking a diverse range of volunteers with the purpose of improving human health.
In concordance with the international PGP, KPGP was started to collect and distribute personal genome and trait data. > more about us

 

 KPGP Public Data
       
Korean Foreigner Miltiracial(people)    Monozygotic Twin      Dizygotic Twin
         
     
Rare Disease Patients KTuCloud+PGI      

 

KPGP Public Data FTP Download
  1. The Genomics Institute (TGI) FTP Site
  2. Korean Bioinformation Center (KOBIC) FTP Site

 

KPGP Data Usage
  1. The genome data of PGP-Korea is hosted and provided by Genome Research Foundation.  Anyone can use the data freely.
  2. If you would like to acquire further information about the data for research publication and collaboration, please contact us.
  3. Contact: info@pgi.re.kr / 82-43-235-8687

 

KPGP Data Statistics
  1. The HTML report for the KPGP data statistics can be seen here.
 

 

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