Bioinformatics journal lists

Nature
Science
Nature Review Genetics
Nature Genetics
Nature Biotechnology
Nature Molecualr System Biology
PLoS Biology
PLoS Genetics
PLoS Computational Biology
PNAS
Journal of Proteome Research
Genome Biology
Genome Research
Genomics, Proteomics & Bioinformatics (GPB)
Applied Bioinformatics
Artificial Intelligence in Medicine
Artificial Intelligence
Bioinformatics
BMC Bioinformatics
BMC Medical Imaging
Briefings in Bioinformatics
Chemometrics and Intelligent Laboratory Systems
Computerized Medical Imaging Graphics

Data Mining and Knowledge Discovery
Healthcare Informatics
Healthcare Information Management and Communications Canada
In Silico Biology
International Journal of Medical Informatics
Journal of Biomedical Informatics
Journal of Chemical Information and Modeling
Journal of Computational Biology
Journal of Machine Learning Research
Journal of Molecular Graphics and Modelling
Journal of Molecular Modelling
Journal of Structural and Functional Genomics
Journal of the American Medical Informatics Association
Journal of the Medical Library Association (JMLA)
Machine Learning
Metabolic Engineering
Molecular and Cellular Proteomics
Molecules and Cells
Nature Structural and Molecular Biology
Nucleic Acids Research
Online Journal of Bioinformatics (OJB)
The Online Journal of Issues in Nursing
Protein Engineering
Protein Science
Proteins: Structure, Function, and Bioinformatics
Structure