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Bioinformatics

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Bioinformatics and computational biology involve the use of techniques including applied mathematics, informatics, statistics, computer science, artificial intelligence, chemistry, and biochemistry to solve biological problems usually on the molecular level. Research in computational biology often overlaps with systems biology. Major research efforts in the field include sequence alignment, gene finding, genome assembly, protein structure alignment, protein structure prediction, prediction of gene expression and protein-protein interactions, and the modeling of evolution.

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<h2>Introduction</h2>

<li>Baxevanis, A.D., Petsko, G.A., Stein, L.D., and Stormo, G.D., eds., Current Protocols in Bioinformatics. Wiley, 2007. <a class="internal" href="http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=0471250937">ISBN 0-471-25093-7</a> </li>

<li>Claverie, J.M. and C. Notredame, Bioinformatics for Dummies. Wiley, 2003. <a class="internal" href="http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=0764516965">ISBN 0-7645-1696-5</a> </li>

<li>Cristianini, N. and Hahn, M. <a class="external text" title="http://www.computational-genomics.net/" rel="nofollow" href="http://www.computational-genomics.net/~~" rel="nofollow~~">Introduction to Computational Genomics</a>, Cambridge University Press, 2006. (<a class="internal" href="http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=9780521671910">ISBN 9780521671910</a> | <a class="internal" href="http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=0521671914">ISBN 0521671914</a>) </li>

<li>Durbin, R., S. Eddy, A. Krogh and G. Mitchison, Biological sequence analysis. Cambridge University Press, 1998. <a class="internal" href="http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=0521629713">ISBN 0-521-62971-3</a> </li>

<li>Gilbert, D. <a class="external text" title="http://bib.oxfordjournals.org/cgi/content/abstract/5/3/300" rel="nofollow" href="http://bib.oxfordjournals.org/cgi/content/abstract/5/3/300~~" rel="nofollow~~">Bioinformatics software resources</a>. Briefings in Bioinformatics, Briefings in Bioinformatics, 2004 5(3):300-304. </li>

<li>Keedwell, E., Intelligent Bioinformatics: The Application of Artificial Intelligence Techniques to Bioinformatics Problems. Wiley, 2005. <a class="internal" href="http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=0470021756">ISBN 0-470-02175-6</a> </li>

<li>Kohane, et al. Microarrays for an Integrative Genomics. The MIT Press, 2002. <a class="internal" href="http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=026211271X">ISBN 0-262-11271-X</a> </li>

<li>

<ul>

<li><a class="external text" title="http://bioinformatics.org/" rel="nofollow" href="http://bioinformatics.org/~~" rel="nofollow~~">Bioinformatics Organization (Bioinformatics.Org): The Open-Access Institute</a> </li> <li><a class="external text" title="http://www.embnet.org/" rel="nofollow" href="http://www.embnet.org/~~" rel="nofollow~~">EMBnet</a> </li> <li><a class="external text" title="http://www.ebi.ac.uk/" rel="nofollow" href="http://www.ebi.ac.uk/~~" rel="nofollow~~">European Bioinformatics Institute</a> </li> <li><a class="external text" title="http://www.embl.org/" rel="nofollow" href="http://www.embl.org/~~" rel="nofollow~~">European Molecular Biology Laboratory</a> </li> <li><a class="external text" title="http://www.iscb.org/" rel="nofollow" href="http://www.iscb.org/~~" rel="nofollow~~">The International Society for Computational Biology</a> </li> <li><a class="external text" title="http://www.ncbi.nlm.nih.gov/" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/~~" rel="nofollow~~">National Center for Biotechnology Information</a> </li> <li><a class="external text" title="http://www.nih.gov" rel="nofollow" href="http://www.nih.gov/~~" rel="nofollow~~">National Institutes of Health homepage</a> </li> <li><a class="external text" title="http://www.open-bio.org/" rel="nofollow" href="http://www.open-bio.org/~~" rel="nofollow~~">Open Bioinformatics Foundation: umbrella non-profit organization supporting certain open-source projects in bioinformatics</a> </li>

<li><a title="Swiss Institute of Bioinformatics" href="http://en.wikipedia.org/wiki/Swiss_Institute_of_Bioinformatics">Swiss Institute of Bioinformatics</a> </li>

<li><a title="Wellcome Trust Sanger Institute" href="http://en.wikipedia.org/wiki/Wellcome_Trust_Sanger_Institute">Wellcome Trust Sanger Institute</a> </li>

<li>Major Journals

<ul>

<li><a class="external text" title="http://www.almob.org/" rel="nofollow" href="http://www.almob.org/~~" rel="nofollow~~">Algorithms in Molecular Biology</a> </li> <li><a class="external text" title="http://bioinformatics.oupjournals.org/" rel="nofollow" href="http://bioinformatics.oupjournals.org/~~" rel="nofollow~~">Bioinformatics journal</a> </li> <li><a class="external text" title="http://www.biomedcentral.com/bmcbioinformatics" rel="nofollow" href="http://www.biomedcentral.com/bmcbioinformatics~~" rel="nofollow~~">BMC Bioinformatics journal</a> </li> <li><a class="external text" title="http://bib.oxfordjournals.org/" rel="nofollow" href="http://bib.oxfordjournals.org/~~" rel="nofollow~~">Briefings in Bioinformatics</a> </li> <li><a class="external text" title="http://www.la-press.com/evolbio.htm" rel="nofollow" href="http://www.la-press.com/evolbio.htm~~" rel="nofollow~~">Evolutionary Bioinformatics</a> </li> <li><a class="external text" title="http://www.genome.org" rel="nofollow" href="http://www.genome.org/~~" rel="nofollow~~">Genome Research</a> </li> <li><a class="external text" title="http://www.bepress.com/ijb/" rel="nofollow" href="http://www.bepress.com/ijb/~~" rel="nofollow~~">The International Journal of Biostatistics</a> </li> <li><a class="external text" title="http://www.liebertpub.com/publication.aspx?pub_id=31" rel="nofollow" href="http://www.liebertpub.com/publication.aspx?pub_id=31~~" rel="nofollow~~">Journal of Computational Biology</a> </li> <li><a class="external text" title="http://www.nature.com/msb/index.html" rel="nofollow" href="http://www.nature.com/msb/index.html~~" rel="nofollow~~">Molecular Systems Biology</a> </li> <li><a class="external text" title="http://compbiol.plosjournals.org" rel="nofollow" href="http://compbiol.plosjournals.org/~~" rel="nofollow~~">PLoS Computational Biology</a> </li> <li><a class="external text" title="http://www.bepress.com/sagmb/" rel="nofollow" href="http://www.bepress.com/sagmb/~~" rel="nofollow~~">Statistical Applications in Genetic and Molecular Biology</a> </li>

</ul>

</li>

<li>Other sites

<ul>

<li><a class="external text" title="http://www.biostatsresearch.com/repository/" rel="nofollow" href="http://www.biostatsresearch.com/repository/~~" rel="nofollow~~">The Collection of Biostatistics Research Archive</a> </li> <li><a class="external text" title="http://www.ornl.gov/TechResources/Human_Genome/research/informatics.html" rel="nofollow" href="http://www.ornl.gov/TechResources/Human_Genome/research/informatics.html~~" rel="nofollow~~">Human Genome Project and Bioinformatics</a> </li> <li><a class="external text" title="http://dmoz.org/Science/Biology/Bioinformatics/Research_Groups/" rel="nofollow" href="http://dmoz.org/Science/Biology/Bioinformatics/Research_Groups/~~" rel="nofollow~~">List of Bioinformatics Research Groups</a> at the <a title="Open Directory Project" href="http://en.wikipedia.org/wiki/Open_Directory_Project">Open Directory Project</a> </li>

</ul>

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