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#NCBI Handbook~~ <div class="toc-text"><dl><dt>Part 1. <a class="toc-passive" href="javascript:BVShow('handbook.part.1')">The Databases</a> ~~ </dt><dd><dl><dt~~><a href="http://www.ncbi.nlm.nih.gov/books/~~bookres.fcgi/handbook/ch1d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres~~bv.fcgi~~/system_default/pdf.gif" border="0" name~~?call=~~"PDFDoc" /></a> 1~~bv. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.2')">GenBank: The Nucleotide Sequence Database</a> Ilene Mizrachi. Created: October 9, 2002, Updated: July 27, 2004 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch2d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 2. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.42')">PubMed: The Bibliographic Database</a> Kathi Canese, Jennifer Jentsch, and Carol Myers. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch3d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 3. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.94')">Macromolecular Structure Databases</a> Eric Sayers and Steve Bryant. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch4d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 4. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.246')">The Taxonomy Project</a> Scott Federhen. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch5.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 5. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.ch5')">The Single Nucleotide Polymorphism Database (dbSNP) of Nucleotide Sequence Variation</a> Adrienne Kitts and Stephen Sherry. Created: October 09, 2002, Updated: May 03, 2006 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch6d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 6. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.337')">The Gene Expression Omnibus (GEO): A Gene Expression and Hybridization Repository</a> Ron Edgar and Alex Lash. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch7d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 7. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.405')">Online Mendelian Inheritance in Man (OMIM): A Directory of Human Genes and Genetic Disorders</a> Donna Maglott, Joanna S. Amberger, and Ada Hamosh. Created: October 9, 2002 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch8d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 8. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.423')">The NCBI BookShelf: Searchable Biomedical Books</a> Bart Trawick, Jeff Beck, and Jo McEntyre. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch9d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 9. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.457')">PubMed Central (PMC): An Archive for Literature from Life Sciences Journals</a> Jeff Beck and Ed Sequeira. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch10d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 10. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.496')">The SKY/CGH Database for Spectral Karyotyping and Comparative Genomic Hybridization Data</a> Turid Knutsen, Vasuki Gobu, Rodger Knaus, Thomas Ried, and Karl Sirotkin. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch11d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 11. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.1776')">The Major Histocompatibility Complex Database, dbMHC</a> Adrienne Kitts, Michael Feolo, and Wolfgang Helmberg. Created: May 27, 2003, Updated: August 13, 2003 </dt></dl></dd></dl><dl><dt>Part 2. <a class="toc-passive" href="javascript:BVShow('handbook.part.537')">Data Flow and Processing</a> </dt><dd><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch12d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 12. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.538')">Sequin: A Sequence Submission and Editing Tool</a> Jonathan Kans. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch13.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookresView.~~fcgi/system_default/pdf~~.~~gif" border="0" name="PDFDoc" /></a> <a class="toc-passive" href~~ShowTOC&rid=~~"javascript:BVShow('~~handbook.~~chapter.ch13')">13. The Processing of Biological Sequence Data at NCBI</a> Karl Sirotkin, Tatiana Tatusova, Eugene Yaschenko, and Mark Cavanaugh. ~~Created: October 09, 2002, Updated: March 14, 2006 </dt></dl><dl><dt><a href="~~http://www.ncbi.nlm.nih.gov/books/~~bookres~~bv.fcgi~~/handbook/ch14d1.pdf" target~~?call=~~"_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres~~bv.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 14. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.1440')">Genome Assembly and Annotation Process</a> Paul Kitts. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl></dd></dl><dl><dt>Part 3. <a class="toc-passive" href="javascript:BVShow('handbook.part.587')">Querying and Linking the Data</a> </dt><dd><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch15d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 15. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.588')">The Entrez Search and Retrieval System</a> Jim Ostell. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch16d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 16. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.610')">The BLAST Sequence Analysis Tool</a> Tom Madden. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch17d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 17. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.650')">LinkOut: Linking to External Resources from Entrez Databases</a> Kathy Kwan. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch18d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 18. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.681')">The Reference Sequence (RefSeq) Project</a> Kim D. Pruitt, Tatiana Tatusova, and James M. Ostell. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch19d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 19. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.ch19')">Entrez Gene: A Directory of Genes</a> Donna Maglott, Kim Pruitt, and Tatiana Tatusova. Created: March 3, 2005 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch20d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 20. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.1562')">Using the Map Viewer to Explore Genomes</a> Susan M. Dombrowski and Donna Maglott. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch21d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 21. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.857')">UniGene: A Unified View of the Transcriptome</a> Joan U. Pontius, Lukas Wagner, and Gregory D. Schuler. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch22d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 22. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.885')">The Clusters of Orthologous Groups (COGs) Database: Phylogenetic Classification of Proteins from Complete Genomes</a> Eugene V. Koonin. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl></dd></dl><dl><dt>Part 4. <a class="toc-passive" href="javascript:BVShow('handbook.part.913')">User Support</a> </dt><dd><dl><dt><a href="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/handbook/ch23d1.pdf" target="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 23. <a class="toc-passive" href="javascript:BVShow('handbook.chapter.914')">User Services: Helping You Find Your Way</a> David Wheeler and Barbara Rapp. Created: October 9, 2002, Updated: August 13, 2003 </dt></dl><dl><dt><a href="http://www.ncbi.nlm.nih.~~gov/books/bookres~~.~~fcgi/handbook/ch24d1.pdf" target~~ShowTOC&rid="_blank"><img alt="PDF Document" src="http://www.ncbi.nlm.nih.gov/books/bookres.fcgi/system_default/pdf.gif" border="0" name="PDFDoc" /></a> 24. <a class="toc-passive" href="javascript:BVShow('handbook.~~chapter.1679')">Exercises: Using Map Viewer</a> David Wheeler, Kim Pruitt, Donna Maglott, Susan Dombrowski, and Andrei Gabrelian. Created: November 4, 2002, Updated: August 13, 2003 </dt>~~</~~dl></dd></dl><dl><dt><~~a ~~class="toc-passive" href="javascript:BVShow('handbook.glossary.1237')"~~>~~Glossary~~</astrong> Created: October 9, 2002, Updated: April 30, 2003 </dt><dd></dd></dl></div>

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