Difference between revisions of "KPGP 00145"

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<ul>
+
<h3>How to download</h3>
    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Public Profile ID :&nbsp; KPGP_00145 <br />
+
<ul class="genome_list_title">
    </strong></span></span></li>
+
     <li>After accessing to the OPEN KPGP website, select the desired data from DATA DOWNLOAD to download it through the Web and FTP.</li>
    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Gender :&nbsp; M <br />
+
     <li>Please understand that the downloading may be very slow due to Network load. (The speed of downloading 20 people&rsquo;s data through KT cloud is stable, please use it as an alternative.)</li>
     </strong></span></span></li>
+
     <li>The KPGP data can be downloaded from the <a href="ftp://biodisk.org/Release/KPGP/KPGP_Data_2016_Release_Candidate/">FTP</a> site.</li>
     <li><span style="font-size: small"><span style="font-family: Arial"><strong>Nationality :&nbsp; Korea <br />
 
    </strong></span></span></li>
 
     <li><span style="font-size: small"><span style="font-family: Arial"><strong>Ethnic Group :&nbsp; East Asian <br />
 
    </strong></span></span></li>
 
    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Platform :&nbsp; Illumina,HiSeq2000</strong></span></span></li>
 
 
</ul>
 
</ul>
<p>&nbsp;
+
<p>&nbsp;</p>
<table border="0" cellspacing="1" cellpadding="1" width="100%">
+
<table style="height: 392px; width: 895px" cellspacing="1" cellpadding="1" width="895" border="1">
 
     <tbody>
 
     <tbody>
 
         <tr>
 
         <tr>
             <td style="text-align: center" bgcolor="#ff0000" width="50%"><b><span style="color: #ffffff"><span style="font-size: large"><span style="font-family: Arial">BioFTP Download</span></span></span></b></td>
+
             <td style="text-align: center">No</td>
             <td style="text-align: center" bgcolor="#006600" colspan="4"><span style="color: #ffffff"><span style="font-size: large"><b>Torrent Download</b></span></span></td>
+
            <td style="text-align: center">Public ID</td>
 +
            <td style="text-align: center">Ethnic Group</td>
 +
            <td style="text-align: center">Gender</td>
 +
            <td style="text-align: center">Nationality</td>
 +
             <td style="text-align: center">WGS</td>
 +
            <td style="text-align: center">WES</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>
+
             <td style="text-align: center">&nbsp;1</td>
            <p><span style="font-size: large"><span style="font-family: Arial"><strong>Genetic data Download</strong></span></span><span style="font-size: small"><span style="font-family: Arial"><strong><br />
+
             <td style="text-align: center">KPGP-00117</td>
             </strong></span></span></p>
+
            <td style="text-align: center">&nbsp;East Asian</td>
            <ul>
+
            <td style="text-align: center">&nbsp;M</td>
                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Raw Data</strong> <a target="_blank" href="http://opengenome.net/index.php/KPGP_00145_KT">Raw Data</a><br />
+
             <td style="text-align: center">&nbsp;Korea</td>
                </span></span></li>
+
             <td style="text-align: center">O</td>
                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Aligned Data</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0031/MAPPING_RESULT/KPGP145_G_110915_HiSeq_EastAsian_Kor_M.merge.bam">Mapping</a> / <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0031/MAPPING_RESULT/KPGP145_G_110915_HiSeq_EastAsian_Kor_M.merge.bam.bai">Mapping Index</a><br />
+
             <td style="text-align: center">&nbsp;</td>
                </span></span></li>
 
                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Nonsynonymous SNVs</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0031/NS_SNV/KPGP145_G_110915_HiSeq_EastAsian_Kor_M.NSSNV.gz">Nonsynonymous SNVs</a><br />
 
                </span></span></li>
 
                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Read me</strong> <a target="_blank" href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0031/README/KPGP_145.readme.txt">Read me</a><br />
 
                </span></span></li>
 
                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Genome Variation</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0031/SNV/KPGP145_G_110915_HiSeq_EastAsian_Kor_M.vcf.SNV.gz">SNVs</a> <a href="nofile">CNVs</a> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0031/INDEL/KPGP145_G_110915_HiSeq_EastAsian_Kor_M.vcf.INDEL.gz">INDELs</a> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0031/SV/KPGP145_G_110915_HiSeq_EastAsian_Kor_M.sv.gz">SVs</a>&nbsp;</span></span></li>
 
            </ul>
 
            <p>&nbsp;</p>
 
            </td>
 
             <td colspan="3">
 
            <ul>
 
                <li style="text-align: center"><span style="font-size: large"><span style="font-family: Arial"><strong><span style="color: #000000"><a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP_Torrent/TGP2011D0031.torrent">Torrent Download</a></span></strong></span></span></li>
 
            </ul>
 
            </td>
 
        </tr>
 
    </tbody>
 
</table>
 
</p>
 
<p><br />
 
&nbsp;
 
<table border="1" cellspacing="1" cellpadding="1" width="100%" align="center">
 
    <tbody>
 
        <tr>
 
             <td style="text-align: center" bgcolor="#3366cc"><span style="color: #ffffff"><span style="font-size: large"><b>Clinic Survey </b></span></span></td>
 
             <td style="text-align: center" bgcolor="#ff33cc"><span style="color: #ffffff"><span style="font-size: large"><b>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Trait Survey </b></span></span></td>
 
        </tr>
 
        <tr>
 
            <td>physical examination</td>
 
            <td>Physical Characteristics</td>
 
        </tr>
 
        <tr>
 
            <td>electrocardiography</td>
 
            <td>Eating Habits</td>
 
        </tr>
 
        <tr>
 
            <td>pulmonary function test</td>
 
            <td>Tooth</td>
 
        </tr>
 
        <tr>
 
            <td>fundus .intraocular pressure</td>
 
            <td>Hair</td>
 
        </tr>
 
        <tr>
 
            <td>Bio-Age test</td>
 
            <td>Sleeping</td>
 
        </tr>
 
        <tr>
 
            <td>bone densitometry</td>
 
            <td>Skin</td>
 
        </tr>
 
        <tr>
 
            <td>gynecology</td>
 
            <td>Allergies</td>
 
        </tr>
 
        <tr>
 
            <td>breast cancer test</td>
 
            <td>Women's Health</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>body composition test</td>
+
             <td style="text-align: center">&nbsp;2</td>
             <td>Disease</td>
+
             <td style="text-align: center">KPGP-00120</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>general examination of urine</td>
+
             <td style="text-align: center">&nbsp;3</td>
             <td>Family Disease History</td>
+
             <td style="text-align: center">KPGP-00121</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>complete blood cell count</td>
+
             <td style="text-align: center">&nbsp;4</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00122</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>liver function test</td>
+
             <td style="text-align: center">&nbsp;5</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00124</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>renal function test</td>
+
             <td style="text-align: center">&nbsp;6</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00125</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>the functional test of heart and lipid test</td>
+
             <td style="text-align: center">&nbsp;7</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00127</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>diabetes mellitus test</td>
+
             <td style="text-align: center">&nbsp;8</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00128</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>iron deficiency anemia</td>
+
             <td style="text-align: center">&nbsp;9</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00129</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>exocrine pancreatic function test</td>
+
             <td style="text-align: center">&nbsp;10</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center"><font class="Apple-style-span">KPGP-00131</font></td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>myocardial infarction</td>
+
             <td style="text-align: center">&nbsp;11</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00132</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>inflammatory disease</td>
+
             <td style="text-align: center">&nbsp;12</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00134</td>
 +
            <td style="text-align: center">&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>tests for allergic diseases</td>
+
             <td style="text-align: center">&nbsp;13</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00136</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>Electrolyte</td>
+
             <td style="text-align: center">&nbsp;14</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00137</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>thyroid function test</td>
+
             <td style="text-align: center">&nbsp;15</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00138</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>tumor marker test</td>
+
             <td style="text-align: center">&nbsp;16</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00139</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>Skeletal diseases</td>
+
             <td style="text-align: center">&nbsp;17</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00141</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;F</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>tests for hepatitis</td>
+
             <td style="text-align: center">&nbsp;18</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00142</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>Endocrine Function Test</td>
+
             <td style="text-align: center">&nbsp;19</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00144</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td>infection</td>
+
             <td style="text-align: center">&nbsp;20</td>
             <td>&nbsp;</td>
+
             <td style="text-align: center">KPGP-00145</td>
 +
            <td style="text-align: center">&nbsp;&nbsp;East Asian</td>
 +
            <td style="text-align: center">&nbsp;M</td>
 +
            <td style="text-align: center">&nbsp;Korea</td>
 +
            <td style="text-align: center">O</td>
 +
            <td style="text-align: center">&nbsp;</td>
 
         </tr>
 
         </tr>
 
     </tbody>
 
     </tbody>
 
</table>
 
</table>
</p>
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<p>&nbsp;</p>
<p><span style="color: #ff0000"><span style="font-size: x-large"><b><a href="/userfiles/Research Surveys_LIST_clinic.xls">Click here to Download</a></b></span></span></p>
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<div id="bottom"><dl><dt></dt><dt>Data Usage </dt><dd></dd><dd>1. The genome data&nbsp;is provided by Genome Research Foundation. Anyone can use the data freely. </dd><dd>2. People who would like to acquire further information about the data for research publication and collaboration, please contact us. </dd><dt>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Contact: <a href="mailto:info@pgi.re.kr">info@pgi.re.kr</a> / 82-43-235-8687</dt></dl></div>
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<p>&nbsp;</p>

Revision as of 10:47, 22 June 2012

How to download

  • After accessing to the OPEN KPGP website, select the desired data from DATA DOWNLOAD to download it through the Web and FTP.
  • Please understand that the downloading may be very slow due to Network load. (The speed of downloading 20 people’s data through KT cloud is stable, please use it as an alternative.)
  • The KPGP data can be downloaded from the FTP site.

 

No Public ID Ethnic Group Gender Nationality WGS WES
 1 KPGP-00117  East Asian  M  Korea O  
 2 KPGP-00120   East Asian  M  Korea O  
 3 KPGP-00121   East Asian  F  Korea O  
 4 KPGP-00122   East Asian  F  Korea O  
 5 KPGP-00124   East Asian  M  Korea O  
 6 KPGP-00125   East Asian  M  Korea O  
 7 KPGP-00127   East Asian  M  Korea O  
 8 KPGP-00128   East Asian  F  Korea O  
 9 KPGP-00129   East Asian  M  Korea O  
 10 KPGP-00131   East Asian  M  Korea O  
 11 KPGP-00132   East Asian  F  Korea O  
 12 KPGP-00134  East Asian  F  Korea O  
 13 KPGP-00136   East Asian  M  Korea O  
 14 KPGP-00137   East Asian  F  Korea O  
 15 KPGP-00138   East Asian  F  Korea O  
 16 KPGP-00139   East Asian  F  Korea O  
 17 KPGP-00141   East Asian  F  Korea O  
 18 KPGP-00142   East Asian  M  Korea O  
 19 KPGP-00144   East Asian  M  Korea O  
 20 KPGP-00145   East Asian  M  Korea O  

 

Data Usage
1. The genome data is provided by Genome Research Foundation. Anyone can use the data freely.
2. People who would like to acquire further information about the data for research publication and collaboration, please contact us.
            Contact: info@pgi.re.kr / 82-43-235-8687