Difference between revisions of "KPGP 00142"

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<ul>
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Public Profile ID :&nbsp; KPGP_00142 <br />
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    </strong></span></span></li>
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Gender :&nbsp; M <br />
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    </strong></span></span></li>
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Nationality :&nbsp; Korea <br />
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    </strong></span></span></li>
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Ethnic Group :&nbsp; East Asian <br />
 +
    </strong></span></span></li>
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    <li><span style="font-size: small"><span style="font-family: Arial"><strong>Platform :&nbsp; Illumina,HiSeq2000</strong></span></span></li>
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</ul>
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<p>&nbsp;
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             <td style="text-align: center">&nbsp; <a href="http://opengenome.kr">Korean</a>&nbsp; |&nbsp; <a href="http://opengenome.net">English</a></td>
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             <td style="text-align: center" bgcolor="#ff0000" width="50%"><b><span style="color: #ffffff"><span style="font-size: large"><span style="font-family: Arial">BioFTP Download</span></span></span></b></td>
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            <td style="text-align: center" bgcolor="#006600" colspan="4"><span style="color: #ffffff"><span style="font-size: large"><b>Torrent Download</b></span></span></td>
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        </tr>
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        <tr>
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            <td>
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            <p><span style="font-size: large"><span style="font-family: Arial"><strong>Genetic data Download</strong></span></span><span style="font-size: small"><span style="font-family: Arial"><strong><br />
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            </strong></span></span></p>
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            <ul>
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Raw Data</strong> <a target="_blank" href="http://opengenome.net/index.php/KPGP_00142_KT">Raw Data</a><br />
 +
                </span></span></li>
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Aligned Data</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0030/MAPPING_RESULT/KPGP142_G_110915_HiSeq_EastAsian_Kor_M.merge.bam">Mapping</a> / <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0030/MAPPING_RESULT/KPGP142_G_110915_HiSeq_EastAsian_Kor_M.merge.bam.bai">Mapping Index</a><br />
 +
                </span></span></li>
 +
                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Nonsynonymous SNVs</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0030/NS_SNV/KPGP142_G_110915_HiSeq_EastAsian_Kor_M.NSSNV.gz">Nonsynonymous SNVs</a><br />
 +
                </span></span></li>
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Read me</strong> <a target="_blank" href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0030/README/KPGP_142.readme.txt">Read me</a><br />
 +
                </span></span></li>
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                <li><span style="font-size: small"><span style="font-family: Arial"><strong>Genome Variation</strong> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0030/SNV/KPGP142_G_110915_HiSeq_EastAsian_Kor_M.vcf.SNV.gz">SNVs</a> <a href="nofile">CNVs</a> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0030/INDEL/KPGP142_G_110915_HiSeq_EastAsian_Kor_M.vcf.INDEL.gz">INDELs</a> <a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0030/SV/KPGP142_G_110915_HiSeq_EastAsian_Kor_M.sv.gz">SVs</a></span></span></li>
 +
            </ul>
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            <p>&nbsp;</p>
 +
            </td>
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            <td colspan="3">
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            <ul>
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                <li style="text-align: center"><span style="font-size: large"><span style="font-family: Arial"><strong><span style="color: #000000"><a href="ftp://kpgp:qwerzxcv@bioftp.org/BiO/Distribute/Open-KPGP_Torrent/TGP2011D0030.torrent">Torrent Download</a></span></strong></span> </span></li>
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            </ul>
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            </td>
 
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<p>&nbsp;&nbsp;</p>
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&nbsp;</p>
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<table cellspacing="1" cellpadding="1" width="100%" border="0">
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<p>&nbsp;<br />
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&nbsp;
 +
<table border="1" cellspacing="1" cellpadding="1" width="100%" align="center">
 
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             <td style="text-align: center"><img alt="" width="411" height="101" src="/userfiles/434.jpg" /></td>
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             <td style="text-align: center" bgcolor="#3366cc"><span style="color: #ffffff"><span style="font-size: large"><b>Clinic Survey </b></span></span></td>
 +
            <td style="text-align: center" bgcolor="#ff33cc"><span style="color: #ffffff"><span style="font-size: large"><b>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Trait Survey </b></span></span></td>
 +
        </tr>
 +
        <tr>
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            <td>physical examination</td>
 +
            <td>Physical Characteristics</td>
 +
        </tr>
 +
        <tr>
 +
            <td>electrocardiography</td>
 +
            <td>Eating Habits</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td bgcolor="#66ccff">
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             <td>pulmonary function test</td>
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             <h1 style="font-size: 55px; font-family: Raleway; font-weight: 400; color: rgb(29,1,61); margin: 10px 0px 13px; letter-spacing: -1px; line-height: 1; background-color: rgb(195,227,247); text-rendering: optimizelegibility">PGP Korea</h1>
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             <td>Tooth</td>
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             <h1 style="font-size: 45px; font-family: Raleway; font-weight: 400; color: rgb(29,1,61); margin: 10px 0px 9px; line-height: 1; background-color: rgb(195,227,247); text-rendering: optimizelegibility">
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        </tr>
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             <p style="font-size: 18px; font-family: 'Open Sans', 'Helvetica Neue', Helvetica, Arial, sans-serif; color: rgb(34,34,34); margin: 0px 0px 26px; line-height: 24px">The Personal Genome Project Korea (KPGP) is dedicated to producting publically available personal genome, health, and trait data.</p>
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        <tr>
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             </h1>
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            <td>fundus .intraocular pressure</td>
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             </td>
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            <td>Hair</td>
 +
        </tr>
 +
        <tr>
 +
            <td>Bio-Age test</td>
 +
            <td>Sleeping</td>
 +
        </tr>
 +
        <tr>
 +
            <td>bone densitometry</td>
 +
            <td>Skin</td>
 +
        </tr>
 +
        <tr>
 +
            <td>gynecology</td>
 +
            <td>Allergies</td>
 +
        </tr>
 +
        <tr>
 +
             <td>breast cancer test</td>
 +
             <td>Women's Health</td>
 +
        </tr>
 +
        <tr>
 +
            <td>body composition test</td>
 +
            <td>Disease</td>
 +
        </tr>
 +
        <tr>
 +
            <td>general examination of urine</td>
 +
            <td>Family Disease History</td>
 +
        </tr>
 +
        <tr>
 +
            <td>complete blood cell count</td>
 +
            <td>&nbsp;</td>
 +
        </tr>
 +
        <tr>
 +
             <td>liver function test</td>
 +
             <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
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         <tr>
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             <td>
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             <td>renal function test</td>
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            <p>&nbsp;</p>
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             <td>&nbsp;</td>
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             <p><span style="font-size: medium">Korean Personal Genome Project (KPGP) is a participative research project established by Genome Research Foundation([[GRF]]).<br />
 
−
            The international Personal Genome Project ([[PGP]]), led by U.S. none-profit research group, is founded in 2005 and seeking a diverse range of volunteers with the purpose of improving human health.<br />
 
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            In concordance with the international PGP, KPGP was started to collect and distribute personal genome and trait data. &gt; [[more about us]]</span><span style="font-size: small"> </span></p>
 
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            </td>
 
 
         </tr>
 
         </tr>
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    </tbody>
 
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</table>
 
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<p>&nbsp;</p>
 
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             <td bgcolor="#cc0000" colspan="6"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>&nbsp;KPGP Public Data</b></span></span></td>
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             <td>the functional test of heart and lipid test</td>
 +
            <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td style="text-align: center"><a href="Korean"><img alt="" width="141" height="142" src="/userfiles/1.jpg" /></a></td>
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             <td>diabetes mellitus test</td>
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            <td style="text-align: center"><span style="font-size: large">&nbsp;<a href="Foreigner"><img alt="" width="146" height="137" src="/userfiles/2.jpg" /></a>&nbsp;&nbsp;</span></td>
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             <td>&nbsp;</td>
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            <td style="text-align: center"><span style="font-size: large"><a href="Miltiracial(people)"><img alt="" width="138" height="137" src="/userfiles/4.jpg" /></a>&nbsp;</span></td>
 
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            <td style="text-align: center"><a href="Monozygotic_Twin"><img alt="" width="147" height="138" src="/userfiles/5.jpg" /></a></td>
 
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             <td style="text-align: center"><span style="font-size: large"><a href="Dizygotic_Twin"><img alt="" width="139" height="138" src="/userfiles/6.jpg" /></a></span>&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td style="text-align: center"><b><span style="font-size: medium">[[Korean]]</span></b></td>
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             <td>iron deficiency anemia</td>
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            <td style="text-align: center"><span style="font-size: medium"><strong>[[Foreigner]]</strong></span></td>
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             <td>&nbsp;</td>
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            <td style="text-align: center"><b><span style="font-size: medium">[[Miltiracial(people)]]&nbsp;&nbsp;</span></b></td>
 
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             <td style="text-align: center"><b><span style="font-size: medium">[[&nbsp;Monozygotic Twin]]&nbsp;&nbsp;&nbsp;&nbsp;</span></b></td>
 
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            <td style="text-align: center"><b><span style="font-size: medium">&nbsp;[[Dizygotic Twin]]</span></b></td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td style="text-align: center">&nbsp;</td>
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             <td>exocrine pancreatic function test</td>
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             <td style="text-align: center">&nbsp;</td>
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             <td>&nbsp;</td>
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            <td style="text-align: center">&nbsp;</td>
 
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            <td style="text-align: center">&nbsp;</td>
 
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            <td style="text-align: center">&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td style="text-align: center"><a href="Rare_Disease_Patients"><img alt="" width="145" height="141" src="/userfiles/3.jpg" /></a></td>
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             <td>myocardial infarction</td>
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            <td style="text-align: center"><a href="KTuCloud+PGI"><img alt="" width="141" height="141" src="/userfiles/8.jpg" /></a></td>
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             <td>&nbsp;</td>
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            <td style="text-align: center">&nbsp;</td>
 
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            <td style="text-align: center">&nbsp;</td>
 
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             <td style="text-align: center">&nbsp;</td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td style="text-align: center"><b><span style="font-size: medium">[[Rare Disease Patients]]</span></b></td>
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             <td>inflammatory disease</td>
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            <td style="text-align: center"><b><span style="font-size: medium">[[KTuCloud+PGI]]</span></b></td>
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             <td>&nbsp;</td>
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            <td style="text-align: center">&nbsp;</td>
 
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            <td style="text-align: center">&nbsp;</td>
 
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             <td style="text-align: center">&nbsp;</td>
 
 
         </tr>
 
         </tr>
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    </tbody>
 
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</table>
 
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<p>&nbsp;
 
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<table cellspacing="1" cellpadding="1" width="100%" border="0">
 
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    <tbody>
 
 
         <tr>
 
         <tr>
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             <td bgcolor="#cc0000"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>KPGP Public Data FTP Download</b></span></span></td>
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             <td>tests for allergic diseases</td>
 +
            <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
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             <td style="text-align: left">
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             <td>Electrolyte</td>
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            <ol>
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             <td>&nbsp;</td>
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                <li><span style="font-size: medium"><a href="ftp://biodisk.org/Release/KPGP/">The Genomics Institute (TGI) FTP Site</a></span></li>
 
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                <li><span style="font-size: medium"><a href="ftp://ftp.kobic.re.kr/pub/KPGP/">Korean Bioinformation Center (KOBIC) FTP Site</a></span></li>
 
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             </ol>
 
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            </td>
 
 
         </tr>
 
         </tr>
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    </tbody>
 
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</table>
 
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</p>
 
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<p>&nbsp;
 
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<table cellspacing="1" cellpadding="1" width="100%" border="0">
 
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    <tbody>
 
 
         <tr>
 
         <tr>
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             <td bgcolor="#0033cc" colspan="6"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>KPGP Data Usage</b></span></span></td>
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             <td>thyroid function test</td>
 +
            <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td style="text-align: left" colspan="6">
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             <td>tumor marker test</td>
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            <ol>
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            <td>&nbsp;</td>
−
                <li><span style="font-size: medium">The genome data of PGP-Korea is hosted and provided by [[Genome Research Foundation]]. &nbsp;Anyone can use the data freely.<br />
 
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                </span></li>
 
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                <li><span style="font-size: medium">If you would like to acquire further information about the data for research publication and collaboration, please contact us. <br />
 
−
                </span></li>
 
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                <li><span style="font-size: medium">Contact: </span><span style="font-size: large"><a href="mailto:info@pgi.re.kr"><span style="font-size: medium">info@pgi.re.kr</span></a><span style="font-size: medium"> / 82-43-235-8687</span></span></li>
 
−
            </ol>
 
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            </td>
 
 
         </tr>
 
         </tr>
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    </tbody>
 
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</table>
 
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</p>
 
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<p>&nbsp;
 
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    <tbody>
 
 
         <tr>
 
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             <td bgcolor="#0033cc" colspan="6"><span style="font-size: large"><span style="color: rgb(255,255,255)"><b>KPGP Data Statistics</b></span></span></td>
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             <td>Skeletal diseases</td>
 +
            <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td style="text-align: left" colspan="6">
+
             <td>tests for hepatitis</td>
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            <ol>
+
            <td>&nbsp;</td>
−
                <li><span style="font-size: medium"><a href="ftp://biodisk.org/Release/KPGP/KPGP_Data_2018_Release_Candidate_Report/report.html">The HTML report for the KPGP&nbsp;data statistics can be seen here</a>.<br />
 
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                </span></li>
 
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            </ol>
 
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            </td>
 
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td colspan="6">&nbsp;</td>
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             <td>Endocrine Function Test</td>
 +
            <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
−
             <td style="text-align: center" colspan="6"><img alt="" width="800" height="400" src="/ckfinder/userfiles/images/sequencingDepth_WGS_2018.png" /> <img alt="" width="800" height="400" src="/ckfinder/userfiles/images/sequencingDepth_WES_2018.png" /></td>
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             <td>infection</td>
 +
            <td>&nbsp;</td>
 
         </tr>
 
         </tr>
 
     </tbody>
 
     </tbody>
 
</table>
 
</table>
 
</p>
 
</p>
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<p>&nbsp;</p>
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<p><span style="color: #ff0000"><span style="font-size: x-large"><b><a href="/userfiles/Research Surveys_LIST_clinic.xls">Click here to Download</a></b></span></span></p>

Latest revision as of 17:28, 15 March 2012

  • Public Profile ID :  KPGP_00142
  • Gender :  M
  • Nationality :  Korea
  • Ethnic Group :  East Asian
  • Platform :  Illumina,HiSeq2000

 

BioFTP Download Torrent Download

Genetic data Download

 

 

 
 

Clinic Survey                         Trait Survey
physical examination Physical Characteristics
electrocardiography Eating Habits
pulmonary function test Tooth
fundus .intraocular pressure Hair
Bio-Age test Sleeping
bone densitometry Skin
gynecology Allergies
breast cancer test Women's Health
body composition test Disease
general examination of urine Family Disease History
complete blood cell count  
liver function test  
renal function test  
the functional test of heart and lipid test  
diabetes mellitus test  
iron deficiency anemia  
exocrine pancreatic function test  
myocardial infarction  
inflammatory disease  
tests for allergic diseases  
Electrolyte  
thyroid function test  
tumor marker test  
Skeletal diseases  
tests for hepatitis  
Endocrine Function Test  
infection  

Click here to Download

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