Difference between revisions of "Bioinformatics centers"

From Opengenome.net
 
(10 intermediate revisions by 6 users not shown)
Line 1: Line 1:
−
<p><font size="4">Bioinformatics research and service centers around the world.<br /><br /></font><br /></p>
+
<p><font size="4">Bioinformatics research and service centers around the world.<br />
−
<hr width="60%" size="1" />
+
<br />
−
<p>&nbsp;</p>
+
</font><br />
−
<h3><a name="major">Major Genomic Information Repositories</a></h3>
+
</p>
 +
<hr size="1" width="60%" />
 
<ul>
 
<ul>
−
     <li><a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> The National Center for Biotechnology Information - Bethesda MD, USA&nbsp; ([[Creating NCBI]])</li>
+
     <li><a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> The National Center for Biotechnology Information - Bethesda MD, USA&nbsp; ([[Creating NCBI]]) </li>
 
     <li><a href="http://www.ebi.ac.uk/">EBI</a> The European Bioinformatics Institute - Hinxton, UK </li>
 
     <li><a href="http://www.ebi.ac.uk/">EBI</a> The European Bioinformatics Institute - Hinxton, UK </li>
 
     <li><a href="http://www.kobic.re.kr">KOBIC </a>: The Korean Bioinformation Center, [[Daejeon]], [[South Korea]] </li>
 
     <li><a href="http://www.kobic.re.kr">KOBIC </a>: The Korean Bioinformation Center, [[Daejeon]], [[South Korea]] </li>
Line 16: Line 17:
 
     <li><a href="http://www.bioinfo.cu">BIOINFO</a> National Bioinformatics Center - Havana,&nbsp;Cuba </li>
 
     <li><a href="http://www.bioinfo.cu">BIOINFO</a> National Bioinformatics Center - Havana,&nbsp;Cuba </li>
 
     <li><a href="http://www.genomics.org.cn:8080/bgi/english/index.htm">BGI</a>&nbsp;Beijing Genomics Institue - Beijing,&nbsp;Chinese </li>
 
     <li><a href="http://www.genomics.org.cn:8080/bgi/english/index.htm">BGI</a>&nbsp;Beijing Genomics Institue - Beijing,&nbsp;Chinese </li>
 +
    <li>[http://www.nbic.nl/ NBIC]: Netherlands Bioinformatics Centre </li>
 
</ul>
 
</ul>
−
<font size="3" style="font-weight: bold;">Bioinformatics Research groups</font><br />
+
<font style="FONT-WEIGHT: bold" size="3">Bioinformatics Research groups</font><br />
 
<ul>
 
<ul>
 +
    <li><a href="http://genome.imim.es/">Genome Bioinformatics Lab</a>, Barcelona, Spain </li>
 
     <li><a href="http://www.compbio.dundee.ac.uk/">Barton group at Dundee</a> </li>
 
     <li><a href="http://www.compbio.dundee.ac.uk/">Barton group at Dundee</a> </li>
−
     <li><a href="http://www.ccb.sickkids.ca/bioIntro.html">SickKids' Bioinformatics group</a>, Canada, <br /></li>
+
     <li><a href="http://www.ccb.sickkids.ca/bioIntro.html">SickKids' Bioinformatics group</a>, Canada, <br />
 +
    </li>
 
     <li>[http://bioinformatics.ca/ Bioinformatics.ca], Canada </li>
 
     <li>[http://bioinformatics.ca/ Bioinformatics.ca], Canada </li>
 
     <li><a href="http://www.ocgc.ca/">Ontario Center for Genomic Computing</a>, Canada </li>
 
     <li><a href="http://www.ocgc.ca/">Ontario Center for Genomic Computing</a>, Canada </li>
Line 27: Line 31:
 
</ul>
 
</ul>
 
<li>
 
<li>
−
<h3><br /><a name="med_gen">Medical Genetics</a></h3>
 
 
<ul>
 
<ul>
 
     <li><a href="http://www3.ncbi.nlm.nih.gov/Omim/">OMIM</a> Online Mendelian Inheritance in Man - Bethesda MD, USA </li>
 
     <li><a href="http://www3.ncbi.nlm.nih.gov/Omim/">OMIM</a> Online Mendelian Inheritance in Man - Bethesda MD, USA </li>
Line 38: Line 41:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="develop">Developmental Biology</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://sdb.bio.purdue.edu/">Society for Developmental Biology</a> - West Lafayette IN, USA </li>
 
     <li><a href="http://sdb.bio.purdue.edu/">Society for Developmental Biology</a> - West Lafayette IN, USA </li>
Line 53: Line 56:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="anatomy">Anatomy Resources</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.var.vet.uga.edu/">Veterinary Anatomy and Radiology</a> - Athens GA, USA </li>
 
     <li><a href="http://www.var.vet.uga.edu/">Veterinary Anatomy and Radiology</a> - Athens GA, USA </li>
Line 63: Line 66:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="cell">Cell Lines and Clones</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.atcc.org/">ATCC</a> American Type Culture Collection - Rockville MD, USA </li>
 
     <li><a href="http://www.atcc.org/">ATCC</a> American Type Culture Collection - Rockville MD, USA </li>
Line 76: Line 79:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="mapping">Genome Mapping</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.rzpd.de/">RZPD</a> German Human Genome Project Resource Centre - Berlin, Germany </li>
 
     <li><a href="http://www.rzpd.de/">RZPD</a> German Human Genome Project Resource Centre - Berlin, Germany </li>
Line 86: Line 89:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="us">Genome Centres - USA</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.nhgri.nih.gov/">NIH National Human Genome Research Institute</a> - Bethesda MD </li>
 
     <li><a href="http://www.nhgri.nih.gov/">NIH National Human Genome Research Institute</a> - Bethesda MD </li>
Line 105: Line 108:
 
</li>
 
</li>
 
<li>&nbsp;
 
<li>&nbsp;
−
<h3><br /><a name="international">Genome Centres - International</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.cephb.fr/bio/ceph-genethon-map.html">CEPH</a> - Paris, France </li>
 
     <li><a href="http://www.cephb.fr/bio/ceph-genethon-map.html">CEPH</a> - Paris, France </li>
Line 119: Line 122:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="human">Human Chromosome-Specific Web Sites</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://linkage.rockefeller.edu/chr1/">Chromosome 1</a> Rockefeller University - New York NY, USA </li>
 
     <li><a href="http://linkage.rockefeller.edu/chr1/">Chromosome 1</a> Rockefeller University - New York NY, USA </li>
Line 144: Line 147:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="other_orgs">Genome Projects - Model Organisms</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.mcs.anl.gov/home/compbio/WIT/wit.html">WIT</a> Interactive Metabolic Reconstruction Server - Argonne IL, USA </li>
 
     <li><a href="http://www.mcs.anl.gov/home/compbio/WIT/wit.html">WIT</a> Interactive Metabolic Reconstruction Server - Argonne IL, USA </li>
Line 165: Line 168:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="sequence">Sequence Analysis</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.expasy.ch/">ExPaSy</a> Web Site - Geneva, Switzerland </li>
 
     <li><a href="http://www.expasy.ch/">ExPaSy</a> Web Site - Geneva, Switzerland </li>
Line 193: Line 196:
 
</li>
 
</li>
 
<li>&nbsp;
 
<li>&nbsp;
−
<h3><br /><a name="structure">Structural Biology</a></h3>
 
 
<ul>
 
<ul>
 
     <li><a href="http://www.pdb.bnl.gov/">PDB US</a> Protein Data Bank - Brookhaven NY, USA </li>
 
     <li><a href="http://www.pdb.bnl.gov/">PDB US</a> Protein Data Bank - Brookhaven NY, USA </li>
Line 207: Line 209:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="prot">Proteome Related</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://biobase.dk/cgi-bin/celis">Biobase</a> 2-D Gel Database - Aarhus, Denmark </li>
 
     <li><a href="http://biobase.dk/cgi-bin/celis">Biobase</a> 2-D Gel Database - Aarhus, Denmark </li>
Line 218: Line 220:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><a name="research">Major Research Centres Worldwide</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://www.mrc-lmb.cam.ac.uk/">MRC Laboratory of Molecular Biology</a> - Cambridge, UK </li>
 
     <li><a href="http://www.mrc-lmb.cam.ac.uk/">MRC Laboratory of Molecular Biology</a> - Cambridge, UK </li>
Line 245: Line 247:
 
     <li><a href="http://www.lanl.gov/">Los Alamos National Laboratory</a> - Los Alamos NM, USA </li>
 
     <li><a href="http://www.lanl.gov/">Los Alamos National Laboratory</a> - Los Alamos NM, USA </li>
 
     <li><a href="http://www.ornl.gov/">Oak Ridge National Laboratory</a> - Oak Ridge TN, USA </li>
 
     <li><a href="http://www.ornl.gov/">Oak Ridge National Laboratory</a> - Oak Ridge TN, USA </li>
−
     <li><a href="http://www.sandia.gov/">Sandia National Laboratories</a> - Albuquerque NM and Livermore CA, USA </li>
+
     <li><a href="http://www.sandia.gov/">Sandia National Laboratories</a> - Albuquerque NM and Livermore CA, USA <br />
 +
    </li>
 
</ul>
 
</ul>
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><br /><a name="other">Other Information Resources</a></h3>
 
 
<ul>
 
<ul>
 
     <li><a></a><a href="http://www.who.ch/">WHO</a> World Health Organization - Geneva, Switzerland </li>
 
     <li><a></a><a href="http://www.who.ch/">WHO</a> World Health Organization - Geneva, Switzerland </li>
Line 268: Line 270:
 
</li>
 
</li>
 
<li>
 
<li>
−
<h3><a name="faqs">Frequently Asked Questions</a></h3>
+
<h3>&nbsp;</h3>
 
<ul>
 
<ul>
 
     <li><a href="http://weber.u.washington.edu/~roach/human_genome_progress2.html">How much of the human genome has been sequenced?</a> </li>
 
     <li><a href="http://weber.u.washington.edu/~roach/human_genome_progress2.html">How much of the human genome has been sequenced?</a> </li>
Line 275: Line 277:
 
     <li><a href="http://www.mcs.anl.gov/home/gaasterl/magpie.html">The MAGPIE list of genome projects</a> - Argonne IL, USA </li>
 
     <li><a href="http://www.mcs.anl.gov/home/gaasterl/magpie.html">The MAGPIE list of genome projects</a> - Argonne IL, USA </li>
 
     <li><a href="http://www.cbs.dtu.dk/databases/DOGS/index.html">DOGS</a> Database of Genome Sizes - Copenhagen, Denmark
 
     <li><a href="http://www.cbs.dtu.dk/databases/DOGS/index.html">DOGS</a> Database of Genome Sizes - Copenhagen, Denmark
−
    <h3><a name="eurocomp">Pharma and Biotech Companies - Europe</a></h3>
 
 
     <ul>
 
     <ul>
 
         <li><a href="http://www.astra.com/">Astra</a> - Sweden </li>
 
         <li><a href="http://www.astra.com/">Astra</a> - Sweden </li>
Line 289: Line 290:
 
         <li><a href="http://www.roche.com/">Roche</a> - Switzerland </li>
 
         <li><a href="http://www.roche.com/">Roche</a> - Switzerland </li>
 
         <li><a href="http://www.zeneca.com/">Zeneca</a> - UK </li>
 
         <li><a href="http://www.zeneca.com/">Zeneca</a> - UK </li>
−
         <li><a href="http://www.zynet.co.uk/bpark/Welcome.html/">UK Business Park</a></li>
+
         <li><a href="http://www.zynet.co.uk/bpark/Welcome.html/">UK Business Park</a> </li>
−
         <li>[http://www.lsb.lilly.com/index.html Lilly Systems Biology]</li>
+
         <li>[http://www.lsb.lilly.com/index.html Lilly Systems Biology] </li>
 
     </ul>
 
     </ul>
 
     </li>
 
     </li>
 
     <li>
 
     <li>
−
     <h3>&nbsp;<a name="usacomp">Pharma and Biotech Companies - USA</a></h3>
+
     <h3>&nbsp;</h3>
 
     </li>
 
     </li>
 
     <li>
 
     <li>
Line 328: Line 329:
 
     </li>
 
     </li>
 
     <li>&nbsp; </li>
 
     <li>&nbsp; </li>
−
    <li>
+
</ul>
−
    <h3>extra groups </h3>
+
<p><font size="4">extra groups</font> </p>
−
    </li>
+
<ul>
 
     <li>&nbsp;
 
     <li>&nbsp;
 
     <ul>
 
     <ul>
Line 372: Line 373:
 
         <li><a href="http://www.qb3.org/">QB3 </a>&nbsp;&nbsp;&nbsp; (California Institute for Quantitative Biomedical Research) </li>
 
         <li><a href="http://www.qb3.org/">QB3 </a>&nbsp;&nbsp;&nbsp; (California Institute for Quantitative Biomedical Research) </li>
 
         <li><a href="http://www.sanbi.ac.za/">SANBI - South African National Bioinformatics Institute</a> &nbsp;&nbsp;&nbsp;(University of the Western Cape) </li>
 
         <li><a href="http://www.sanbi.ac.za/">SANBI - South African National Bioinformatics Institute</a> &nbsp;&nbsp;&nbsp;(University of the Western Cape) </li>
 +
        <li>[http://www.sdsc.edu/ SDSC] San Diego Supercomputing Center </li>
 
         <li><a href="http://www.isb-sib.ch/">SIB - Swiss Institute for Bioinformatics</a> &nbsp;&nbsp;&nbsp;(Geneva, Switzerland) </li>
 
         <li><a href="http://www.isb-sib.ch/">SIB - Swiss Institute for Bioinformatics</a> &nbsp;&nbsp;&nbsp;(Geneva, Switzerland) </li>
 
         <li><a href="http://zeon.well.ox.ac.uk/">Sequence Analysis on Zeon </a>&nbsp;&nbsp;&nbsp; (Wellcome Trust Center for Human Genetics, Oxford, UK) </li>
 
         <li><a href="http://zeon.well.ox.ac.uk/">Sequence Analysis on Zeon </a>&nbsp;&nbsp;&nbsp; (Wellcome Trust Center for Human Genetics, Oxford, UK) </li>
 
         <li><a href="http://www.socbin.org/">SocBiN </a>&nbsp;&nbsp;&nbsp;(Society for Bioinformatics in the Nordic Countries) </li>
 
         <li><a href="http://www.socbin.org/">SocBiN </a>&nbsp;&nbsp;&nbsp;(Society for Bioinformatics in the Nordic Countries) </li>
−
         <li><a href="http://www.cgr.ki.se/cgr/groups/sonnhammer/">Sonnhammer Bioinformatics Group </a>&nbsp;&nbsp;&nbsp;(Karolinska Institute, Sweden) </li>
+
         <li><a href="http://www.sbc.su.se/~erison/">Sonnhammer Bioinformatics Group </a>&nbsp;&nbsp;&nbsp;(Karolinska Institute, Sweden) </li>
 
         <li><a href="http://www.hgmp.mrc.ac.uk/CCP11/index.jsp">TBR </a>(Human Genome Mapping Project Resource Centre, UK) </li>
 
         <li><a href="http://www.hgmp.mrc.ac.uk/CCP11/index.jsp">TBR </a>(Human Genome Mapping Project Resource Centre, UK) </li>
 
         <li><a href="http://bioinf.cs.ucl.ac.uk/">UCL Bioinformatics Unit </a>&nbsp;&nbsp;&nbsp;(University College London) </li>
 
         <li><a href="http://bioinf.cs.ucl.ac.uk/">UCL Bioinformatics Unit </a>&nbsp;&nbsp;&nbsp;(University College London) </li>
Line 388: Line 390:
 
     </ul>
 
     </ul>
 
     </li>
 
     </li>
−
     <li><br /></li>
+
     <li><br />
 +
    </li>
 
</ul>
 
</ul>
 
</li>
 
</li>

Latest revision as of 10:22, 1 July 2010

Bioinformatics research and service centers around the world.


  • NCBI The National Center for Biotechnology Information - Bethesda MD, USA  (Creating NCBI)
  • EBI The European Bioinformatics Institute - Hinxton, UK
  • KOBIC : The Korean Bioinformation Center, Daejeon, South Korea
  • GDB US The Genome Database - Baltimore MD, USA
  • GDB UK The Genome Database, European Mirror Site - Hinxton, UK (faster)
  • CHLC Cooperative Human Linkage Center - Iowa City IA, USA
  • TIGR The Institute for Genomic Research - Gaithersburg MD, USA
  • IMAGE Consortium - Livermore CA, USA
  • CIB The Center for Information Biology - Mishima, Japan
  • UBiC The Center for Information Biology - Mishima, Japan
  • BIOINFO National Bioinformatics Center - Havana, Cuba
  • BGI Beijing Genomics Institue - Beijing, Chinese
  • NBIC: Netherlands Bioinformatics Centre

Bioinformatics Research groups

  •  

  •  

  •  

  •  

  •  

  •  

     

  •  

  •  

  •  

  •  

  •  

  •  

  •  

    extra groups

    • Retrieved from "http://Opengenome.net/index.php?title=Bioinformatics_centers&oldid=29845"