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구체적인 단백질 실험 프로토콜

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<strong><em>No7. 8. Preparation of stock solution<br />
<br />
</em></strong>
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<td bgcolor="#0066ff">&nbsp;<strong><font color="#ffff99" size="2">Solution</font></strong></td>
<td bgcolor="#0066ff"><strong><font color="#ffff99" size="2">&nbsp;Method of preparation</font></strong></td>
<td bgcolor="#0066ff"><strong><font color="#ffff99" size="2">&nbsp;Comments</font></strong></td>
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<td bgcolor="#cccccc"><font size="2">&nbsp;<strong>Phosphate-buffered saline (PBS)</strong></font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Dissolve 8.0g NaCl, 0.2g of KCl, 1.44g of&nbsp;&nbsp;Na2HPO4, and 0.24g of KH2PO4 in 800ml&nbsp;of distilled H2O.&nbsp;<br />
&nbsp;Adjust the pH to 7.4.&nbsp;<br />
&nbsp;Adjust&nbsp;&nbsp;the volume to 1L.&nbsp;<br />
&nbsp;Dispense in convenient&nbsp;volumes and sterilize by autoclaving.&nbsp;<br />
&nbsp;Store at&nbsp;room temperature.&nbsp;</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Can be made as a 10X stock.</font></td>
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<td><strong><font size="2">&nbsp;Tris-buffered saline (TBS) (25mM Tris)</font></strong></td>
<td><font size="2">&nbsp;Dissolve 8.0g of NaCl, 0.2g of KCl, and 3g of&nbsp;&nbsp;Tris base in 800ml of distilled H2O.&nbsp;<br />
&nbsp;Adjust the&nbsp;pH to 8.0 with 1M HCl.&nbsp;<br />
&nbsp;Adjust the volume to 1 liter.<br />
&nbsp;Dispense in convenient volumes and sterilize by&nbsp;&nbsp;autoclaving.&nbsp;<br />
&nbsp;Store&nbsp; at&nbsp;&nbsp;room temperature.&nbsp;</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><font size="2">&nbsp;<strong>10% Sodium azide</strong></font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Dissolve 10g of sodium azide in 100ml of distilled H2O.&nbsp;<br />
&nbsp;Store&nbsp; at&nbsp;&nbsp;room temperature.</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Do not use sodium azide for&nbsp;&nbsp;experiments&nbsp; using&nbsp;live organisms&nbsp;or for reactions that&nbsp;<br />
use&nbsp;&nbsp;horseradish&nbsp; peroxidase.</font></td>
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<td><font size="2">&nbsp;</font><strong><font size="2">3% Bovine serum albumin<br />
&nbsp;in phosphate-buffered<br />
&nbsp;saline (3% BSA/PBS)</font></strong></td>
<td><font size="2">&nbsp;Add 3g of BSA (Fraction V) to 100ml of PBS.<br />
&nbsp;Allow to dissolve.&nbsp;<br />
&nbsp;Add o.2 ml of 10% sodium azide.<br />
&nbsp;Store at 4&deg;C.</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><font size="2">&nbsp;<strong>1M Tris</strong></font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Dissolve 121g of Tris base in 800ml of distilled H2O.<br />
&nbsp;Adjust to the desired pH by adding concentrated HCl.<br />
&nbsp;Adjust the volume to 1000ml with distilled H2O.<br />
&nbsp;Dispense in convenient volumes and sterilize by&nbsp;autoclaving.&nbsp;<br />
&nbsp;Store&nbsp; at&nbsp;&nbsp;room temperature.&nbsp;&nbsp;&nbsp;</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;</font></td>
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<td><font size="2">&nbsp;<strong>500mM EDTA</strong></font></td>
<td><font size="2">&nbsp;Add 186g of disodium ethylene diamine tetraacetate-2H2O<br />
&nbsp;to 400ml of distilled H2O.&nbsp;<br />
&nbsp;Add NaOH to adjust the pH&nbsp;to 8.0 and to allow the EDTA to dissolve.&nbsp;<br />
&nbsp;Bring volume to&nbsp;&nbsp; 500ml&nbsp;with&nbsp; distilled&nbsp;H2O.&nbsp;<br />
&nbsp;Dispense in convenient volumes and sterilize&nbsp;by autoclaving.<br />
&nbsp;Store&nbsp; at&nbsp;&nbsp;room temperature.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><font size="2">&nbsp;</font><strong><font size="2">100% (wt/volume)&nbsp;&nbsp;&nbsp;<br />
&nbsp;Trichloroacetic&nbsp;<br />
&nbsp;acetic acid&nbsp;(TCA)</font></strong></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Add 227ml of distilled H2O to a 500-g bottle of TCA</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;</font></td>
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<td><font size="2">&nbsp;<strong>30% Acrylamide mix</strong></font></td>
<td><font size="2">&nbsp;Dissolve 29.2g of acrylamide (electrophoresis frade)&nbsp;&nbsp;and 0.8g of N, N'-methylene-bisacrylamide (electrophoresis&nbsp;grade) in 80ml of distilled H2O.&nbsp;&nbsp;<br />
&nbsp;Adjust the volume&nbsp;to 100ml.&nbsp;&nbsp;<br />
&nbsp;Store&nbsp;at&nbsp;room temperature.&nbsp;&nbsp;</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><font size="2"><strong>&nbsp;1.5M Tris (pH 8.8</strong><em>)</em></font></td>
<td bgcolor="#cccccc"><font size="2"><em>&nbsp;</em>Dissolve 181.5g of Tris base in 800ml of distilled H2O.<br />
&nbsp;Adjust the pH to 8.8 with concentrated HCl.<br />
&nbsp;Adjust the volume to 1 liter.<br />
&nbsp;Dispense in convenient volumes and sterilize by autoclaving.<br />
&nbsp;Store at room temperature.</font></td>
<td bgcolor="#cccccc"><em><font size="2">&nbsp;</font></em></td>
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<td><font size="2"><em>&nbsp;</em><strong>1.0M Tris (pH 6.8</strong><em>)</em></font></td>
<td><font size="2"><em>&nbsp;</em>Dissolve 12.1g of Tris base in 80ml of distilled H2O.<br />
&nbsp;Adjust the pH to 6.8 with concentrated HCl.<br />
&nbsp;Adjust the volume to 100 ml.<br />
&nbsp;Dispense in convenient volumes and sterilize by autoclaving.<br />
&nbsp;Store at room temperature.</font></td>
<td><em><font size="2">&nbsp;</font></em></td>
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<td bgcolor="#cccccc"><font size="2"><em>&nbsp;</em><strong>10% Sodium dodecyl sulfate (SDS)</strong></font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Dissolve 10g of SDS in 100ml of distilled H2O.<br />
&nbsp;Store at room temperature.&nbsp;</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;</font></td>
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<td><strong><font size="2">&nbsp;10% Ammonium persulfate (APS)</font></strong></td>
<td><font size="2">&nbsp;Dissolve 0.5g of ammonium persulfate (electrophoresis grade) in 5ml of distilled H2O.&nbsp;<br />
&nbsp;Store at 4&deg;C.&nbsp;</font></td>
<td><font size="2">&nbsp;Make fresh solution weekly.&nbsp;</font></td>
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<td bgcolor="#cccccc"><strong><font size="2">&nbsp;2X Laemmli sample buffer</font></strong></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Add 4ml of 10% SDS, 2ml of glycerol, and 1.2ml of 1M Tris (pH6.8) to 2.8ml of distilled H2O.<br />
&nbsp;Add 0.01% bromophenol blue as a tracking dye.<br />
&nbsp;Store at room temperature.&nbsp;&nbsp;</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;To prepare 1X sampole buffer, mix 5 parts 2X, 4 parts water, and 1 part 1M DTT.</font></td>
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<td><strong><font size="2">&nbsp;1M Dithiothreitol</font></strong></td>
<td><font size="2">&nbsp;Dissolce 5g of DTT in 32ml of distilled H2O.<br />
&nbsp;Dispense in 1-ml aliquots.&nbsp;<br />
&nbsp;Store at -20&deg;C.&nbsp;</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><strong><font size="2">&nbsp;10X Laemmli running buffer</font></strong></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;To a 10;liter carboy, add 8 liters of distilled&nbsp;H2O, 303g of Tris&nbsp;base, 1442g of glycine, and 100g of SDS.<br />
&nbsp;After&nbsp;all the chemicals have dissolved, adjust the pH to 8.3.&nbsp;<br />
&nbsp;Adjust tje vollume ro 10 liters with H2O.<br />
&nbsp;Store at room temperature.&nbsp;&nbsp;&nbsp;</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;</font></td>
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<td><strong><font size="2">&nbsp;Destain</font></strong></td>
<td><font size="2">&nbsp;To a 10-liter&nbsp;carboy add 2.5 liters of methanol and 700ml of glacial acetic acid.<br />
&nbsp;Adjust the colume to 10 liters with H2O.<br />
&nbsp;Store at room temperature.&nbsp;&nbsp;&nbsp;&nbsp;</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><strong><font size="2">&nbsp;4% Paraformaldehyde</font></strong></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Dissolve EM grade paraformaldehyde in PBS in Pyrex container with stir bar (4g to 100ml)<br />
&nbsp;Add a few drops of NaOH and heat in&nbsp;a hood (keep bottle cap loose_ at 60&nbsp;&deg;C to dissolve.<br />
&nbsp;Cool to room temperature and adjust pH to 7.4.<br />
&nbsp;Make fresh prior to use.</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;</font></td>
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<td><strong><font size="2">&nbsp;Gelvatol</font></strong></td>
<td><font size="2">&nbsp;Dissolve 0.35g of Gelvatol in 3ml of deionized H2O and 1.5ml of glycerol. (PBS can&nbsp;be substituted for water)<br />
&nbsp;Heat the solution with stirring in a boiling water bath until the gelvatol is completely dissolved.<br />
&nbsp;Add anti-fade agents as desired.&nbsp;<br />
&nbsp;Store at 4&nbsp;&deg;C&nbsp;&nbsp;(can be stored for months).</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><strong><font size="2">&nbsp;Glycerol anti-fade mounting medium</font></strong></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;Dissolve in 100ml og glycerol: 5g&nbsp;of n-propyl gallate, 0.25g of DABCO, 2.5mg&nbsp;of p-phenylenediamine.<br />
&nbsp;Add several pellets of NaOH to bring pH above neutral.<br />
&nbsp;Stir thoroughly (&gt;1day).<br />
&nbsp;Store aliquots at -20&deg;C&nbsp;wrapped in foil.</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;</font></td>
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<td><strong><font size="2">&nbsp;1M NaCL/ 0.05M sodium phosphate (pH7.5)</font></strong></td>
<td><font size="2">&nbsp;For liter: Combine 200ml&nbsp;of 5M NaCl, 500 ml of 0.1M sodium phosphate(pH 7.5), and 300ml of H2O.&nbsp;&nbsp;</font></td>
<td><font size="2">&nbsp;</font></td>
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<td bgcolor="#cccccc"><strong><font size="2">&nbsp;NP-40 lysis buffer</font></strong></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;For 1 liter: Combine 30 ml of&nbsp;5M NaCl, 100ml of 10% NP-40, 50ml of&nbsp;1M Tris (pH 8.0), and 820 ml of H2O.<br />
&nbsp;Store at 4&deg;C.&nbsp;</font></td>
<td bgcolor="#cccccc"><font size="2">&nbsp;</font></td>
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<td><font size="2">&nbsp;<strong>RIPA buffer</strong></font></td>
<td><font size="2">&nbsp;For 1&nbsp;liter: Combine 30 ml of 5M NaCl, 100ml of 10% NP-40, 50ml of DOC, 100ml of 10% SDS, 50ml of 1M Tris (pH 8.0), and 670ml of H2O.<br />
&nbsp;Store at 4&deg;C.&nbsp;&nbsp;</font></td>
<td><font size="2">&nbsp;</font></td>
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</table>

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