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SCOP - Revision history
2026-05-12T15:07:26Z
Revision history for this page on the wiki
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http://Opengenome.net/index.php?title=SCOP&diff=11818&oldid=prev
Ksjung at 02:54, 17 August 2006
2006-08-17T02:54:43Z
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 02:54, 17 August 2006</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#800080" size="4"><strong>SCOP (Structural Classification of Proteins)</strong></font></p></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#800080" size="4"><strong>SCOP (Structural Classification of Proteins)</strong></font></p></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p>SCOP은 [[PDB]]에 수록되어져 있는 3D 구조를 체계적으로 분석한 database로서, 수록되어진 [[database]]를 구조적인 특징에 따라서 10개의&nbsp;<br />class로 분류하고 있다. 각각의 class는 2D 구조로 구성되어져 있고, [[topology]]에 의해 fold로 다시 누뉘고 있다. fold는 다시 [[superfamily]]와&nbsp;<br />[[family]], [[domain]]으로 하위 분류가 이루어지며 [[단백질]] 구조의 [[계통 분석학]]적 분석이 체계적으로 이루어져 있다. </p></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p>SCOP은 [[PDB]]에 수록되어져 있는 3D 구조를 체계적으로 분석한 database로서, 수록되어진 [[database]]를 구조적인 특징에 따라서 10개의&nbsp;<br />class로 분류하고 있다. 각각의 class는 2D 구조로 구성되어져 있고, [[topology]]에 의해 fold로 다시 누뉘고 있다. fold는 다시 [[superfamily]]와&nbsp;<br />[[family]], [[domain]]으로 하위 분류가 이루어지며 [[단백질]] 구조의 [[계통 분석학]]적 분석이 체계적으로 이루어져 있다. </p></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#99cc00"><strong># Site</strong></font><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/">http://scop.mrc-lmb.cam.ac.uk/scop/</a><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif">http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif</a></p></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#99cc00"><strong># Site</strong></font><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/">http://scop.mrc-lmb.cam.ac.uk/scop/</a><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif">http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif</a><ins class="diffchange diffchange-inline"><br /><br /><strong><font color="#99cc00"># Paper</font></strong><br /><strong>Authors</strong>. Alexey G. Murzin, John-Marc Chandonia, Antonina Andreeva, Dave Howorth, Loredana Lo Conte, Bartlett G. Ailey, Steven E. Brenner, Tim J. P. Hubbard, and Cyrus Chothia. <a href="http://scop.mrc-lmb.cam.ac.uk/scop/mail.cgi">scop@mrc-lmb.cam.ac.uk</a> <br /><strong>Reference: </strong>Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995). <font size="-1">SCOP</font>: a structural classification of proteins database for the investigation of sequences and structures. <em>J. Mol. Biol.</em> 247, 536-540. [<a href="http://scop.mrc-lmb.cam.ac.uk/scop/ref/1995-jmb-scop.pdf">PDF</a>] <br /><strong>Recent changes</strong> are described in: Lo Conte L., Brenner S. E., Hubbard T.J.P., Chothia C., Murzin A. (2002). <font size="-1">SCOP</font> database in <font size="-1">2002</font>: refinements accommodate structural genomics. <a href="http://nar.oupjournals.org/cgi/content/full/30/1/264"><em>Nucl. Acid Res. </em>30(1), 264-267</a>. [<a href="http://scop.mrc-lmb.cam.ac.uk/scop/ref/nar2002.pdf">PDF</a>] and <br />Andreeva A., Howorth D., Brenner S.E., Hubbard T.J.P., Chothia C., Murzin A.G. (2004). <font size="-1">SCOP</font> database in <font size="-1">2004</font>: refinements integrate structure and sequence family data. <a href="http://nar.oupjournals.org/cgi/reprint/32/suppl_1/D226"><em>Nucl. Acid Res. </em>32:D226-D229</a>. [<a href="http://scop.mrc-lmb.cam.ac.uk/scop/ref/nar2004.pdf">PDF</a>]. </ins></p></div></td></tr>
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Ksjung
http://Opengenome.net/index.php?title=SCOP&diff=11817&oldid=prev
Ksjung at 02:53, 17 August 2006
2006-08-17T02:53:52Z
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<table class="diff diff-contentalign-left" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 02:53, 17 August 2006</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td>
<td colspan="2" class="diff-lineno">Line 1:</td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p>SCOP (Structural Classification of Proteins)</p></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p<ins class="diffchange diffchange-inline">><font color="#800080" size="4"><strong</ins>>SCOP (Structural Classification of Proteins)<ins class="diffchange diffchange-inline"></strong></font></ins></p></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p>SCOP은 <del class="diffchange diffchange-inline">PDB에 </del>수록되어져 있는 3D 구조를 체계적으로 분석한 database로서, 수록되어진 <del class="diffchange diffchange-inline">database를 </del>구조적인 특징에 따라서 10개의 class로 분류하고 있다. 각각의 class는 2D 구조로 구성되어져 있고, <del class="diffchange diffchange-inline">topology에 </del>의해 fold로 다시 누뉘고 있다. fold는 다시 <del class="diffchange diffchange-inline">superfamily와 </del>family, <del class="diffchange diffchange-inline">domain으로 </del>하위 분류가 이루어지며 단백질 구조의 계통 <del class="diffchange diffchange-inline">분석학적 </del>분석이 체계적으로 이루어져 있다. </p></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p>SCOP은 <ins class="diffchange diffchange-inline">[[PDB]]에 </ins>수록되어져 있는 3D 구조를 체계적으로 분석한 database로서, 수록되어진 <ins class="diffchange diffchange-inline">[[database]]를 </ins>구조적인 특징에 따라서 10개의<ins class="diffchange diffchange-inline">&nbsp;<br /></ins>class로 분류하고 있다. 각각의 class는 2D 구조로 구성되어져 있고, <ins class="diffchange diffchange-inline">[[topology]]에 </ins>의해 fold로 다시 누뉘고 있다. fold는 다시 <ins class="diffchange diffchange-inline">[[superfamily]]와&nbsp;<br />[[</ins>family<ins class="diffchange diffchange-inline">]]</ins>, <ins class="diffchange diffchange-inline">[[domain]]으로 </ins>하위 분류가 이루어지며 <ins class="diffchange diffchange-inline">[[</ins>단백질<ins class="diffchange diffchange-inline">]] </ins>구조의 <ins class="diffchange diffchange-inline">[[</ins>계통 <ins class="diffchange diffchange-inline">분석학]]적 </ins>분석이 체계적으로 이루어져 있다. </p></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p># Site<br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/">http://scop.mrc-lmb.cam.ac.uk/scop/</a><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif">http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif</a></p></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p<ins class="diffchange diffchange-inline">><font color="#99cc00"><strong</ins>># Site<ins class="diffchange diffchange-inline"></strong></font></ins><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/">http://scop.mrc-lmb.cam.ac.uk/scop/</a><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif">http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif</a></p></div></td></tr>
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Ksjung
http://Opengenome.net/index.php?title=SCOP&diff=11816&oldid=prev
Ksjung at 02:52, 17 August 2006
2006-08-17T02:52:59Z
<p></p>
<p><b>New page</b></p><div><p>SCOP (Structural Classification of Proteins)</p><br />
<p>SCOP은 PDB에 수록되어져 있는 3D 구조를 체계적으로 분석한 database로서, 수록되어진 database를 구조적인 특징에 따라서 10개의 class로 분류하고 있다. 각각의 class는 2D 구조로 구성되어져 있고, topology에 의해 fold로 다시 누뉘고 있다. fold는 다시 superfamily와 family, domain으로 하위 분류가 이루어지며 단백질 구조의 계통 분석학적 분석이 체계적으로 이루어져 있다. </p><br />
<p># Site<br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/">http://scop.mrc-lmb.cam.ac.uk/scop/</a><br /><a href="http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif">http://scop.mrc-lmb.cam.ac.uk/scop/I/scop_logo_small.gif</a></p></div>
Ksjung