http://Opengenome.net/index.php?action=history&feed=atom&title=Pairwise_Alignment
Pairwise Alignment - Revision history
2026-05-06T23:34:21Z
Revision history for this page on the wiki
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http://Opengenome.net/index.php?title=Pairwise_Alignment&diff=15813&oldid=prev
210.218.222.235 at 04:17, 4 September 2006
2006-09-04T04:17:05Z
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 04:17, 4 September 2006</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#800080" size="4"><strong>Pairwise Alignment</strong></font></p></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#800080" size="4"><strong>Pairwise Alignment</strong></font></p></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p>Pairwise Alignment는 정렬대상이 2개의 Amino acid - Amino acid 이거나 <del class="diffchange diffchange-inline">Protein </del>- <del class="diffchange diffchange-inline">Protein </del>일때 주로 [[homology]]([[상동성]])을 나타내기&nbsp;<br />위해 사용되는 방법이다. 상동성 검색을 위하여 가장 기초적인 방법이기도 하며, 보다 복잡한 문제 해결을 위한 [[algorithm]]들은 대부분&nbsp;<br />Pairwise Alignment algorithm과 연관되는 것들이다.<br /></p></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p>Pairwise Alignment는 정렬대상이 2개의 Amino acid - Amino acid 이거나<ins class="diffchange diffchange-inline">&nbsp;DNA </ins>-<ins class="diffchange diffchange-inline">&nbsp;DNA </ins>일때 주로 [[homology]]([[상동성]])을 나타내기&nbsp;<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>위해 사용되는 방법이다. 상동성 검색을 위하여 가장 기초적인 방법이기도 하며, 보다 복잡한 문제 해결을 위한 [[algorithm]]들은 대부분&nbsp;<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Pairwise Alignment algorithm과 연관되는 것들이다.<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></p></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h4><font face="굴림" color="#99cc00">Pairwise Alignment ([[FASTA]] format)</font></h4></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h4><font face="굴림" color="#99cc00">Pairwise Alignment ([[FASTA]] format)</font></h4></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong>&gt;seq 1</strong></font><font face="Courier New"><br />MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAGCCDPPK<br /></font><font face="Courier New"><strong>&gt;seq 2</strong></font><font face="Courier New"><br />DPPKADPKGGGFHRNARKKDNGGPALGSREDQSAKAGG<br /></font><font face="굴림"><br /></font></p></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong>&gt;seq 1</strong></font><font face="Courier New"><br /></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong><br /><font color="#99cc00" size="3">Alignment result<br /></font><br />seq 1</strong></font><font face="Courier New"> &nbsp;&nbsp;MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAG-CCDPPK<br />&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;||||||||| &nbsp;|||||.: &nbsp;&nbsp;&nbsp;&nbsp;|||||||||||||||||&nbsp;<br /></font><font face="Courier New"><strong>seq 2</strong></font><font face="Courier New"> &nbsp;&nbsp;---DPPKADPKG--GGFHRNARKK-DNGGPALGSREDQSAKAGG------<br /><br /></font></p></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAGCCDPPK<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></font><font face="Courier New"><strong>&gt;seq 2</strong></font><font face="Courier New"><br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>DPPKADPKGGGFHRNARKKDNGGPALGSREDQSAKAGG<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></font><font face="굴림"><br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></font></p></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong><br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><font color="#99cc00" size="3">Alignment result<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></font><br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>seq 1</strong></font><font face="Courier New"> &nbsp;&nbsp;MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAG-CCDPPK<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;||||||||| &nbsp;|||||.: &nbsp;&nbsp;&nbsp;&nbsp;|||||||||||||||||&nbsp;<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></font><font face="Courier New"><strong>seq 2</strong></font><font face="Courier New"> &nbsp;&nbsp;---DPPKADPKG--GGFHRNARKK-DNGGPALGSREDQSAKAGG------<br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><br /></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></font></p></div></td></tr>
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210.218.222.235
http://Opengenome.net/index.php?title=Pairwise_Alignment&diff=11795&oldid=prev
125.184.51.44 at 07:15, 15 August 2006
2006-08-15T07:15:20Z
<p></p>
<table class="diff diff-contentalign-left" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 07:15, 15 August 2006</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#800080" size="4"><strong>Pairwise Alignment</strong></font></p></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p><font color="#800080" size="4"><strong>Pairwise Alignment</strong></font></p></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p>Pairwise Alignment는 정렬대상이 2개의 Amino acid - Amino acid 이거나 Protein - Protein 일때 주로 [[homology]]([[상동성]])을 나타내기&nbsp;<br />위해 사용되는 방법이다. 상동성 검색을 위하여 가장 기초적인 방법이기도 하며, 보다 복잡한 문제 해결을 위한 [[algorithm]]들은 대부분&nbsp;<br />Pairwise Alignment algorithm과 연관되는 것들이다.<br /></p></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><p>Pairwise Alignment는 정렬대상이 2개의 Amino acid - Amino acid 이거나 Protein - Protein 일때 주로 [[homology]]([[상동성]])을 나타내기&nbsp;<br />위해 사용되는 방법이다. 상동성 검색을 위하여 가장 기초적인 방법이기도 하며, 보다 복잡한 문제 해결을 위한 [[algorithm]]들은 대부분&nbsp;<br />Pairwise Alignment algorithm과 연관되는 것들이다.<br /></p></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><h4><font face="굴림">Pairwise Alignment ([[FASTA]] format)</font></h4></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><h4><font face="굴림<ins class="diffchange diffchange-inline">" color="#99cc00</ins>">Pairwise Alignment ([[FASTA]] format)</font></h4></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong>&gt;<del class="diffchange diffchange-inline">seq1</del></strong></font><font face="Courier New"><br /><del class="diffchange diffchange-inline">MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAGCCDPPKADPKGGSRDRVRRCIRANLLVASLLTV</del><br /></font><font face="Courier New"><strong>&gt;<del class="diffchange diffchange-inline">seq2</del></strong></font><font face="Courier New"><br /><del class="diffchange diffchange-inline">DPPKADPKGGGFHRNARKKDNGGPALGSREDQSAKAGGCCQWERTASGSRDRVRRCIRANLLVLLTVAAVV</del></<del class="diffchange diffchange-inline">font</del>></<del class="diffchange diffchange-inline">p></del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong>&gt;<ins class="diffchange diffchange-inline">seq 1</ins></strong></font><font face="Courier New"><br /><ins class="diffchange diffchange-inline">MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAGCCDPPK</ins><br /></font><font face="Courier New"><strong>&gt;<ins class="diffchange diffchange-inline">seq 2</ins></strong></font><font face="Courier New"><br /><ins class="diffchange diffchange-inline">DPPKADPKGGGFHRNARKKDNGGPALGSREDQSAKAGG</ins><<ins class="diffchange diffchange-inline">br </ins>/></<ins class="diffchange diffchange-inline">font</ins>><font face="굴림"><br /></font></<ins class="diffchange diffchange-inline">p</ins>></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline"><h4</del>><font face="굴림"><br /><del class="diffchange diffchange-inline">(b) 정렬된 2개의 단백질서열</del></font></<del class="diffchange diffchange-inline">h4</del>></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong><ins class="diffchange diffchange-inline"><br /><font color="#99cc00" size="3">Alignment result<br /></font><br />seq 1</ins></strong></font><font face="Courier New"> &nbsp;&nbsp;MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAG-CCDPPK<br />&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;||||||||| &nbsp;|||||.: &nbsp;&nbsp;&nbsp;&nbsp;|||||||||||||||||&nbsp;<br /></font><font face="Courier New"><strong><ins class="diffchange diffchange-inline">seq 2</ins></strong></font><font face="Courier New"> &nbsp;&nbsp;---DPPKADPKG--GGFHRNARKK-<ins class="diffchange diffchange-inline">DNGGPALGSREDQSAKAGG--</ins>----<br /><br /></font></p></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><p><font face="Courier New"><strong><del class="diffchange diffchange-inline">seq1</del></strong></font><font face="Courier New"> &nbsp;&nbsp;MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAG-CCDPPK<br />&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;||||||||| &nbsp;|||||.: &nbsp;&nbsp;&nbsp;&nbsp;||||||||||||||||| <del class="diffchange diffchange-inline">||. </del>&nbsp;<del class="diffchange diffchange-inline">:</del><br /></font><font face="Courier New"><strong><del class="diffchange diffchange-inline">seq2</del></strong></font><font face="Courier New"> &nbsp;&nbsp;---DPPKADPKG--GGFHRNARKK-<del class="diffchange diffchange-inline">DNGGPALGSREDQSAKAGGCCQWER<br /><br /></font><font face="Courier New"><strong>seq1</strong></font><font face="Courier New"> &nbsp;&nbsp;ADPKGGSRDRVRRCIRANLLVASLLTV</del>----<br /><del class="diffchange diffchange-inline">&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;. &nbsp;&nbsp;&nbsp;|||||||||||||||| &nbsp;|||| &nbsp;&nbsp;&nbsp;</del><br /><del class="diffchange diffchange-inline"></font><font face="Courier New"><strong>seq2</strong></font><font face="Courier New"> &nbsp;&nbsp;TAS--GSRDRVRRCIRANLLV--LLTVAAVV</del></font></p></div></td><td colspan="2"> </td></tr>
</table>
125.184.51.44
http://Opengenome.net/index.php?title=Pairwise_Alignment&diff=11794&oldid=prev
Ksjung at 07:13, 15 August 2006
2006-08-15T07:13:16Z
<p></p>
<p><b>New page</b></p><div><p><font color="#800080" size="4"><strong>Pairwise Alignment</strong></font></p><br />
<p>Pairwise Alignment는 정렬대상이 2개의 Amino acid - Amino acid 이거나 Protein - Protein 일때 주로 [[homology]]([[상동성]])을 나타내기&nbsp;<br />위해 사용되는 방법이다. 상동성 검색을 위하여 가장 기초적인 방법이기도 하며, 보다 복잡한 문제 해결을 위한 [[algorithm]]들은 대부분&nbsp;<br />Pairwise Alignment algorithm과 연관되는 것들이다.<br /></p><br />
<h4><font face="굴림">Pairwise Alignment ([[FASTA]] format)</font></h4><br />
<p><font face="Courier New"><strong>&gt;seq1</strong></font><font face="Courier New"><br />MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAGCCDPPKADPKGGSRDRVRRCIRANLLVASLLTV<br /></font><font face="Courier New"><strong>&gt;seq2</strong></font><font face="Courier New"><br />DPPKADPKGGGFHRNARKKDNGGPALGSREDQSAKAGGCCQWERTASGSRDRVRRCIRANLLVLLTVAAVV</font></p><br />
<h4><font face="굴림"><br />(b) 정렬된 2개의 단백질서열</font></h4><br />
<p><font face="Courier New"><strong>seq1</strong></font><font face="Courier New"> &nbsp;&nbsp;MAVDPPKADPKGSSGGFHRKSADDPKNGGPALGSREDQSAKAG-CCDPPK<br />&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;||||||||| &nbsp;|||||.: &nbsp;&nbsp;&nbsp;&nbsp;||||||||||||||||| ||. &nbsp;:<br /></font><font face="Courier New"><strong>seq2</strong></font><font face="Courier New"> &nbsp;&nbsp;---DPPKADPKG--GGFHRNARKK-DNGGPALGSREDQSAKAGGCCQWER<br /><br /></font><font face="Courier New"><strong>seq1</strong></font><font face="Courier New"> &nbsp;&nbsp;ADPKGGSRDRVRRCIRANLLVASLLTV----<br />&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;. &nbsp;&nbsp;&nbsp;|||||||||||||||| &nbsp;|||| &nbsp;&nbsp;&nbsp;<br /></font><font face="Courier New"><strong>seq2</strong></font><font face="Courier New"> &nbsp;&nbsp;TAS--GSRDRVRRCIRANLLV--LLTVAAVV</font></p></div>
Ksjung