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<p><strong>Protein engineering</strong> is the application of science, mathematics, and bioinformatics to the process of developing valuable proteins. It has been an old discipline, with much research taking place into the understanding of protein folding and protein recognition for protein design principles.</p>
<p>There are two general strategies for protein engineering. The first is known as <em>rational design</em>, in which the scientist uses detailed knowledge of the structure and function of the protein to make desired changes. This has the advantage of being generally inexpensive and easy, since site-directed mutagenesis techniques are well-developed. However, there is a major drawback in that detailed structural knowledge of a protein is often unavailable, and even when it is available, it can be extremely difficult to predict the effects of various mutations.</p>